RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 MEX3CQ5U5Q3 659 aaKnown RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 MORN5Q5VZ52 161 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 PLA2G4FQ68DD2 849 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 CEP85Q6P2H3 762 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 LCTLQ6UWM7 567 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 ABRAXAS1Q6UWZ7 409 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 LRIG3Q6UXM1 1119 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 OTOAQ7RTW8 1153 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 MIER3Q7Z3K6 550 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 CENPVQ7Z7K6 275 aaPredicted RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 CCDC25Q86WR0 208 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 DHX40Q8IX18 779 aaKnown RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 MMP21Q8N119 569 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 PAQR4Q8N4S7 273 aaPredicted RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 RASSF8Q8NHQ8 419 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 FIBINQ8TAL6 211 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 PIGKQ92643 395 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 RPL36ALQ969Q0 106 aaKnown RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 PABPC5Q96DU9 382 aaKnown RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 SPACA9Q96E40 222 aaPredicted RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 SLITRK1Q96PX8 696 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 MXRA8Q9BRK3 442 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 ANP32EQ9BTT0 268 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 TUBB2BQ9BVA1 445 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 SPATC1LQ9H0A9 340 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 CDT1Q9H211 546 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 ABCG8Q9H221 673 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 HIPK3Q9H422 1215 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 PLEKHA4Q9H4M7 779 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 DNAJC18Q9H819 358 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 NOL11Q9H8H0 719 aaKnown RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 ACTR5Q9H9F9 607 aaPredicted RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 MAGEE1Q9HCI5 957 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 COMMD8Q9NX08 183 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 GAR1Q9NY12 217 aaKnown RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 DLL3Q9NYJ7 618 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 ERAP1Q9NZ08 941 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 ABI3Q9P2A4 366 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 TRPC4Q9UBN4 977 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 HEY2Q9UBP5 337 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 TSPYL4Q9UJ04 414 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 HACL1Q9UJ83 578 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 SH3BGRL2Q9UJC5 107 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 DBNLQ9UJU6 430 aaKnown RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 FBXW11Q9UKB1 542 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 FBXO4Q9UKT5 387 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 LSM4Q9Y4Z0 139 aaKnown RBP3.3□□□□□ -1.88
ZEB1-224ENST00000606161 CEPT1Q9Y6K0 416 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 KIDINS220Q9ULH0 1771 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 E9PCH4 1651 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 RIMBP3CA6NJZ7 1639 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 RIMBP3BA6NNM3 1639 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 LAMC1P11047 1609 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 TRPM1Q7Z4N2 1603 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 RIMBP3Q9UFD9 1639 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 MAP3K4Q9Y6R4 1608 aa3.3□□□□□ -1.88
ZEB1-224ENST00000606161 PTPRTO14522 1441 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 SPATA31E1Q6ZUB1 1445 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 A0A1B0GVM2 712 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 LNP1A1A4G5 178 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 A4D1N5 150 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 MAGEB17A8MXT2 336 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 CCDC188H7C350 402 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 SMAD9O15198 467 aaKnown RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 ASAP2O43150 1006 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 KINO60870 393 aaKnown RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 MOSPD3O75425 235 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 ZWINTO95229 277 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 SIX3O95343 332 aaPredicted RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 GUCA1CO95843 209 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 TOP3BO95985 862 aaKnown RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 GH2P01242 217 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 MMP3P08254 477 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 LINGO3P0C6S8 592 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 SUPT20HL2P0C7V6 817 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 CCDC192P0DO97 292 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 PCP11498 1178 aaKnown RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 ETFAP13804 333 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 ARF4P18085 180 aaPredicted RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 ITGAXP20702 1163 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 ACHEP22303 614 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 CTNNB1P35222 781 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 PRKCIP41743 596 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 MTHFRP42898 656 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 POLR2FP61218 127 aaKnown RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 TUBB4BP68371 445 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 IL1RL1Q01638 556 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 RBPJQ06330 500 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 NPRL3Q12980 569 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 HSPB3Q12988 150 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 MTA1Q13330 715 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 PPIGQ13427 754 aaKnown RBP eCLIP3.29□□□□□ -1.883e-7■■■■■ 28.4
ZEB1-224ENST00000606161 NEDD9Q14511 834 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 KPNB1Q14974 876 aaKnown RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 TAF7Q15545 349 aaPredicted RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 TAZQ16635 292 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 CERKLQ49MI3 558 aaPredicted RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 CXorf66Q5JRM2 361 aaPredicted RBP3.29□□□□□ -1.88
ZEB1-224ENST00000606161 SIGIRRQ6IA17 410 aa3.29□□□□□ -1.88
ZEB1-224ENST00000606161 CASC4Q6P4E1 433 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms