RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NUSAP1Q9BXS6 441 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 TDRD1Q9BXT4 1180 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 TIMMDC1Q9NPL8 285 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 HCSTQ9UBK5 93 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 PHF24Q9UPV7 400 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 VPS26AO75436 327 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 OR4F21O95013 312 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 RASAL1O95294 804 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 MLYCDO95822 493 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 PYGLP06737 847 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 PKMP14618 531 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 MC4RP32245 332 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 OXCT1P55809 520 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 KCTD21Q4G0X4 260 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 NANOGP8Q6NSW7 305 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 PTRH1Q86Y79 214 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 CPNE9Q8IYJ1 553 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 OFCC1Q8IZS5 231 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 EFHBQ8N7U6 833 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 TSPEARQ8WU66 669 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 UPF1Q92900 1129 aaKnown RBP eCLIP20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 HBEGFQ99075 208 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 BRINP2Q9C0B6 783 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 NANOGQ9H9S0 305 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 SARS2Q9NP81 518 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 SCUBE2Q9NQ36 999 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 CD274Q9NZQ7 290 aa20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 TRMT6Q9UJA5 497 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 TSR3Q9UJK0 312 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-225ENST00000600733 H3BNC9 293 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 E2F3O00716 465 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 ACSL4O60488 711 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 CR2P20023 1033 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 RFC2P35250 354 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 SGSHP51688 502 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 GPRIN3Q6ZVF9 776 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 SPRED1Q7Z699 444 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 GPSM1Q86YR5 675 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 ERI1Q8IV48 349 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 FNDC5Q8NAU1 212 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 CD200R1Q8TD46 325 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 GAB3Q8WWW8 586 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 PLEKHG4BQ96PX9 1271 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 SOX17Q9H6I2 414 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 OR6C75A6NL08 312 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 IQCF5A8MTL0 148 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 GIPC1O14908 333 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 ZDHHC11BP0C7U3 371 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 LPOP22079 712 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 ERVK-8P63133 956 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 ZRANB3Q5FWF4 1079 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 C6orf136Q5SQH8 315 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 TMTC4Q5T4D3 741 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 ACBD5Q5T8D3 534 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 OR56A4Q8NGH8 313 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 PROKR1Q8TCW9 393 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 NUDT8Q8WV74 236 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 SEPHS2Q99611 448 aa20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.02■□□□□ 0.89e-6■■■■■ 32.4
SHKBP1-225ENST00000600733 RPF2Q9H7B2 306 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 LEF1Q9UJU2 399 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-225ENST00000600733 A0A087WXM4 84 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 CBX4O00257 560 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 ARL1P40616 181 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 IL2P60568 153 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 C5orf22Q49AR2 442 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 PYCR3Q53H96 274 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 TXNDC11Q6PKC3 985 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 SLC2A7Q6PXP3 512 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 TRAF7Q6Q0C0 670 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 DENND1CQ8IV53 801 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 ANAPC2Q9UJX6 822 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 AGO1Q9UL18 857 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 RAI2Q9Y5P3 530 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 SYNCRIPO60506 623 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 GATMP50440 423 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 ERVPABLB-1P60509 514 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 FAM189BP81408 668 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 GRIK2Q13002 908 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 GPR17Q13304 367 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 C18orf21Q32NC0 220 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 SPATS1Q496A3 300 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 PDCD4Q53EL6 469 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 LETMD1Q6P1Q0 360 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 Q6ZSR9 355 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 FAM81AQ8TBF8 368 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 SEPT8Q92599 483 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 SPATA17Q96L03 361 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 EBF1Q9UH73 591 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 SUN2Q9UH99 717 aa20.01■□□□□ 0.79
SHKBP1-225ENST00000600733 KDELR3O43731 214 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 GJB5O95377 273 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 FCGR1AP12314 374 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 ATF6P18850 670 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 HRH2P25021 359 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 MRPL19P49406 292 aaKnown RBP20■□□□□ 0.79
SHKBP1-225ENST00000600733 CDH4P55283 916 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 CTBSQ01459 385 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 PRKCZQ05513 592 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 TGFBIQ15582 683 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms