RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 RXRGP48443 463 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 POLD2P49005 469 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 B4GALNT1Q00973 533 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 BNC1Q01954 994 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 PPARDQ03181 441 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 EIF2B5Q13144 721 aaKnown RBP12.02□□□□□ -0.49
DNMT1-218ENST00000589294 CTBP1Q13363 440 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 NAB1Q13506 487 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 GTF2H3Q13889 308 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 KHDC1Q4VXA5 237 aaKnown RBP12.02□□□□□ -0.49
DNMT1-218ENST00000589294 TPRG1LQ5T0D9 272 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 CAPN12Q6ZSI9 719 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 TRIM74Q86UV6 250 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 GSPT2Q8IYD1 628 aaKnown RBP12.02□□□□□ -0.49
DNMT1-218ENST00000589294 RASGEF1AQ8N9B8 481 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 CLPBQ9H078 707 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 ARFGAP3Q9NP61 516 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 FAM86C1Q9NVL1 165 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 TRNAU1APQ9NX07 287 aaKnown RBP12.02□□□□□ -0.49
DNMT1-218ENST00000589294 KLQ9UEF7 1012 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 SNX11Q9Y5W9 270 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 TNRC6BQ9UPQ9 1833 aaKnown RBP12.02□□□□□ -0.49
DNMT1-218ENST00000589294 ZNF106Q9H2Y7 1883 aaKnown RBP12.02□□□□□ -0.49
DNMT1-218ENST00000589294 CACNA1EQ15878 2313 aa12.02□□□□□ -0.49
DNMT1-218ENST00000589294 PRSS38A1L453 326 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 CCDC151A5D8V7 595 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 H3BMM5 538 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 KMOO15229 486 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 GRID2O43424 1007 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 OR1I1O60431 355 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 DNAJC6O75061 913 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 MTX2O75431 263 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 RASGRP1O95267 797 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ACSL3O95573 720 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 C1QAP02745 245 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 AHSGP02765 367 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ESR1P03372 595 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 FUCA1P04066 466 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 GSTM1P09488 218 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 NME1P15531 152 aaKnown RBP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 RPS3P23396 243 aaKnown RBP eCLIP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 SLC1A2P43004 574 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ARRB1P49407 418 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 HK3P52790 923 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 HNRNPKP61978 463 aaKnown RBP eCLIP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 IRX4P78413 519 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 GSTM4Q03013 218 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 SLC29A2Q14542 456 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ZNF423Q2M1K9 1284 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ALG11Q2TAA5 492 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 KBTBD12Q3ZCT8 623 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 BCL7AQ4VC05 210 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 PYCR3Q53H96 274 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ZNF648Q5T619 568 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 DOK6Q6PKX4 331 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 TMEM220Q6QAJ8 160 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 LAYNQ6UX15 382 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 LDB1Q86U70 411 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 LRRTM4Q86VH4 590 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 DENND6AQ8IWF6 608 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 CNPY4Q8N129 248 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 SDR16C5Q8N3Y7 309 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 HNRNPLLQ8WVV9 542 aaKnown RBP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 OR1E3Q8WZA6 343 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 LPGAT1Q92604 370 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 TSACCQ96A04 125 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 SGF29Q96ES7 293 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ELF4Q99607 663 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 CCDC77Q9BR77 488 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 BOCQ9BWV1 1114 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 SLC13A1Q9BZW2 595 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 P2RY12Q9H244 342 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ACSS3Q9H6R3 686 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 CYP4F12Q9HCS2 524 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 FGF22Q9HCT0 170 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ZNHIT2Q9UHR6 403 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 SUFUQ9UMX1 484 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 PCDHB1Q9Y5F3 818 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 COMMD10Q9Y6G5 202 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 USP34Q70CQ2 3546 aa12.01□□□□□ -0.49
DNMT1-218ENST00000589294 ZFHX2Q9C0A1 2572 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-218ENST00000589294 C17orf113A0A1B0GUU1 675 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 CXorf49A8MYA2 514 aaPredicted RBP12□□□□□ -0.49
DNMT1-218ENST00000589294 PATE3B3GLJ2 98 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 YKT6O15498 198 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 SGTAO43765 313 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 HAUS5O94927 633 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 OR56A5P0C7T3 313 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 JUNDP17535 347 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 GABRB3P28472 473 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 PI4KAP42356 2102 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 NHLH1Q02575 133 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 GRIK2Q13002 908 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 LRP8Q14114 963 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 CSRP2Q16527 193 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 KLHL38Q2WGJ6 581 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 HLA-BQ31612 363 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 GRTP1Q5TC63 336 aa12□□□□□ -0.49
DNMT1-218ENST00000589294 MICALCLQ6ZW33 695 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms