RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 PLEKHM1Q9Y4G2 1056 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 ST14Q9Y5Y6 855 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 OTOGLQ3ZCN5 2332 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 DNAH14Q0VDD8 3507 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 A0A1B0GTQ1 180 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 OR2AG2A6NM03 316 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 CDX4O14627 284 aaPredicted RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 CHUKO15111 745 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 VEGFDO43915 354 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 SDC3O75056 442 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 PIAS1O75925 651 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 S1PR4O95977 384 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 TNFP01375 233 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 C1QAP02745 245 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 IVLP07476 585 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 CELA2BP08218 269 aaPredicted RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 ATP1B2P14415 290 aaPredicted RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 NME1P15531 152 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 AKT1P31749 480 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 SLC1A2P43004 574 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 GNPDA1P46926 289 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 RXRGP48443 463 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 MPP1Q00013 466 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 C1orf61Q13536 156 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 FRG1Q14331 258 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 TYSND1Q2T9J0 566 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 PYCR3Q53H96 274 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 TEDDM1Q5T9Z0 273 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF470Q6ECI4 717 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 TMEM220Q6QAJ8 160 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 CRTC3Q6UUV7 619 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 IL27RAQ6UWB1 636 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF547Q8IVP9 402 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 MINDY1Q8N5J2 469 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 CLDN19Q8N6F1 224 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 GPR161Q8N6U8 529 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 BEND7Q8N7W2 519 aaPredicted RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 EIF1ADQ8N9N8 165 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 CCL4L1Q8NHW4 92 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 COPS8Q99627 209 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 ZDHHC5Q9C0B5 715 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 TMEM168Q9H0V1 697 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 PPANQ9NQ55 473 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 TM7SF3Q9NS93 570 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 UCKL1Q9NWZ5 548 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNHIT2Q9UHR6 403 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 GPSM3Q9Y4H4 160 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 DGKBQ9Y6T7 804 aa10.57□□□□□ -0.72
SMARCA4-213ENST00000587988 TCRBV9S1A1TA0A576 114 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 CXorf49A8MYA2 514 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 GRID2O43424 1007 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 GDF9O60383 454 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 GFRA3O60609 400 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 RASGRP1O95267 797 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 CER1O95813 267 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 GSTA2P09210 222 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 OGNP20774 298 aaKnown RBP10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 GABRB3P28472 473 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 PMLP29590 882 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 TTPAP49638 278 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 GTF2H3Q13889 308 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 ITIH4Q14624 930 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 PLA2G4EQ3MJ16 856 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 PRRT3Q5FWE3 981 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 AARS2Q5JTZ9 985 aaKnown RBP10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 LYPLAL1Q5VWZ2 237 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 MRNIPQ6NTE8 343 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 WDR93Q6P2C0 686 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 PACS1Q6VY07 963 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 CERS6Q6ZMG9 384 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 CEP128Q6ZU80 1094 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 KANSL1Q7Z3B3 1105 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 C11orf96Q7Z7L8 435 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 SDCCAG8Q86SQ7 713 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 GATAD2AQ86YP4 633 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 GALNT13Q8IUC8 556 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 TRAPPC5Q8IUR0 188 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 CNTN4Q8IWV2 1026 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 SLC25A45Q8N413 288 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 C2CD4AQ8NCU7 369 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 FBF1Q8TES7 1133 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 DCUN1D1Q96GG9 259 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 TTC25Q96NG3 672 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 EDEM2Q9BV94 578 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 LRRC61Q9BV99 259 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 TXLNGYQ9BZA5 131 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 CLPBQ9H078 707 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 TSPYL1Q9H0U9 437 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 RMI1Q9H9A7 625 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 VPS37BQ9H9H4 285 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 FBXO6Q9NRD1 293 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 SLC23A2Q9UGH3 650 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 APOBEC3BQ9UH17 382 aaKnown RBP10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 FBXO5Q9UKT4 447 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 CRYL1Q9Y2S2 319 aa10.56□□□□□ -0.72
SMARCA4-213ENST00000587988 BPTFQ12830 3046 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 PIKFYVEQ9Y2I7 2098 aa10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 UBA6A0AVT1 1052 aaPredicted RBP10.55□□□□□ -0.72
SMARCA4-213ENST00000587988 IQCF5A8MTL0 148 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms