RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 JRKO75564 520 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 SCRG1O75711 98 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 ATP1A1P05023 1023 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 XRCC1P18887 633 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 CMA1P23946 247 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 CDH5P33151 784 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 RORAP35398 523 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 TDGF1P3P51864 188 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 NDUFA8P51970 172 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 SNX16P57768 344 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 PDE1BQ01064 536 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 OTUD4Q01804 1114 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 TLE4Q04727 773 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 CETN1Q12798 172 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 HIF1AQ16665 826 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 CDO1Q16878 200 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 PARP15Q460N3 678 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 CCDC14Q49A88 953 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 COBLL1Q53SF7 1204 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 ZNF324BQ6AW86 544 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 KRBA2Q6ZNG9 492 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 ZNF765Q7L2R6 523 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 MRGPREQ86SM8 312 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 BPHLQ86WA6 291 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 UMODL1-AS1Q8N2C9 162 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 LZTR1Q8N653 840 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 SIDT2Q8NBJ9 832 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 SNX21Q969T3 373 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 ZNF501Q96CX3 271 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 C18orf8Q96DM3 657 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 ZNF514Q96K75 400 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 LRFN5Q96NI6 719 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 SMIM14Q96QK8 99 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 TSG101Q99816 390 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 WDR77Q9BQA1 342 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 MCCC2Q9HCC0 563 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 CNOT6Q9ULM6 557 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 CACNA1CQ13936 2221 aa7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 PRRC2AP48634 2157 aaKnown RBP7.53□□□□□ -1.2
SMARCE1-217ENST00000580654 JMJD1CQ15652 2540 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 FN1P02751 2386 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 CCDC78A2IDD5 438 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 OR5K4A6NMS3 321 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 PCDH17O14917 1159 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 ASMTLO95671 621 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 JCHAINP01591 159 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 ALPPP05187 535 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 PNMA6AP0CW24 399 aaPredicted RBP7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 SLC2A4P14672 509 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 EPHB2P29323 1055 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 SYKP43405 635 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 SCNN1BP51168 640 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 SOX8P57073 446 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 ADORA2A-AS1P86434 159 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 ACY1Q03154 408 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 LRRC63Q05C16 580 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 NSUN2Q08J23 767 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 Q0VFX4 171 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 PAK1Q13153 545 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 GPR19Q15760 415 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 CCDC40Q4G0X9 1142 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 ZNF385CQ66K41 422 aaPredicted RBP7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 PLEKHA7Q6IQ23 1121 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 IRGCQ6NXR0 463 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 CYB5D1Q6P9G0 228 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 ENOSF1Q7L5Y1 443 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 ARCQ7LC44 396 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 TGIF2LYQ8IUE0 185 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 TMEM126BQ8IUX1 230 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 TMEM151BQ8IW70 566 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 TRIM59Q8IWR1 403 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 ACBD4Q8NC06 268 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 PPP4R1Q8TF05 950 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 AP2M1Q96CW1 435 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 CELF6Q96J87 481 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 CEP63Q96MT8 703 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 SLC39A8Q9C0K1 460 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 RAB33BQ9H082 229 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 DLL4Q9NR61 685 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 METTL5Q9NRN9 209 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 SEMA3GQ9NS98 782 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 VPS18Q9P253 973 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 SIK3Q9Y2K2 1263 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 PCDHGC4Q9Y5F7 938 aa7.52□□□□□ -1.21
SMARCE1-217ENST00000580654 RTTNQ86VV8 2226 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 CCL21O00585 134 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 GRID2O43424 1007 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 PALMO75781 387 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 KLF7O75840 302 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 IPO13O94829 963 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 CPP00450 1065 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 VIPP01282 170 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 C8BP07358 591 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 CYP2A6P11509 494 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 BRAFP15056 766 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 CTPS1P17812 591 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 SLC9A1P19634 815 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 KLK2P20151 261 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 OTX2P32243 289 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 KRT9P35527 623 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms