RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	EIF3B	P55884	814 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	SNX16	P57768	344 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	RPS13	P62277	151 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	COL10A1	Q03692	680 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	PTP4A2	Q12974	167 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	GRIK3	Q13003	919 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	IL13RA2	Q14627	380 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	TOMM20	Q15388	145 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	PTPN14	Q15678	1187 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	TTC31	Q49AM3	519 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	SPDYC	Q5MJ68	293 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	CELF3	Q5SZQ8	465 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	CFAP58	Q5T655	872 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	FBXO42	Q6P3S6	717 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	DEF8	Q6ZN54	512 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	CLEC17A	Q6ZS10	378 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	PLPPR4	Q7Z2D5	763 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	TFAP2D	Q7Z6R9	452 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	SNX32	Q86XE0	403 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	PRIMA1	Q86XR5	153 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	KRTAP1-3	Q8IUG1	177 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	FAM114A1	Q8IWE2	563 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	GHDC	Q8N2G8	530 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	GALNT16	Q8N428	558 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	ARL10	Q8N8L6	244 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	SCAI	Q8N9R8	606 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	ZMIZ2	Q8NF64	920 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	ERMN	Q8TAM6	284 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	ETNPPL	Q8TBG4	499 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	TBCK	Q8TEA7	893 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	C2CD4C	Q8TF44	421 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	WIPF2	Q8TF74	440 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	HSPH1	Q92598	858 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	CENPI	Q92674	756 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	THOC1	Q96FV9	657 aa	Known RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	MTMR9	Q96QG7	549 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	AGAP2	Q99490	1192 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	SDF4	Q9BRK5	362 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	TUBB6	Q9BUF5	446 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	TM2D2	Q9BX73	214 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	SLC7A5P2	Q9GIP4	190 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	ABCG4	Q9H172	646 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531		Q9N2J8	555 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	GRHL1	Q9NZI5	618 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	UPB1	Q9UBR1	384 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	GTF3C4	Q9UKN8	822 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	PCDHA12	Q9UN75	941 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	COL1A2	P08123	1366 aa		4.09	□□□□□ -1.75
MSI2-211	ENST00000579531	FAM86B1	E9PN63	330 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	GOLGA6L19	H0YKK7	550 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	HAS3	O00219	553 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	PER2	O15055	1255 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	NEMF	O60524	1076 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	YEATS4	O95619	227 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	NFATC1	O95644	943 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	NUDT3	O95989	172 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	SERPINC1	P01008	464 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	FAM86B2	P0C5J1	330 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	SUPT20HL2	P0C7V6	817 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	FCGR2A	P12318	317 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	LYL1	P12980	280 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	ATP1A3	P13637	1013 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	ST6GAL1	P15907	406 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	YWHAQ	P27348	245 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	OAS2	P29728	719 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	HOXC8	P31273	242 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	USP8	P40818	1118 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	CCR9	P51686	369 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	MNAT1	P51948	309 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	YWHAZ	P63104	245 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	TFF2	Q03403	129 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	ARHGAP1	Q07960	439 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	MRPL28	Q13084	256 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	SLC18A3	Q16572	532 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	CCL14	Q16627	93 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	CLPP	Q16740	277 aa	Predicted RBP	4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	ALG10	Q5BKT4	473 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	ALG10B	Q5I7T1	473 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	EARS2	Q5JPH6	523 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	SPECC1	Q5M775	1068 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	FAM69A	Q5T7M9	428 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	HAUS3	Q68CZ6	603 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	MIS18BP1	Q6P0N0	1132 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	SLC22A25	Q6T423	547 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	IL20RB	Q6UXL0	311 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	ZNF788	Q6ZQV5	615 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	NEK10	Q6ZWH5	1172 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	FAM57B	Q71RH2	274 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	ANKRD33	Q7Z3H0	272 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	TMEM110	Q86TL2	294 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	TLK2	Q86UE8	772 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	PLA2G4D	Q86XP0	818 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	TMC8	Q8IU68	726 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	ZDHHC23	Q8IYP9	409 aa		4.08	□□□□□ -1.76
MSI2-211	ENST00000579531	CPXM2	Q8N436	756 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms