RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 FBXW8Q8N3Y1 598 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 DNAJA4Q8WW22 397 aaPredicted RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 C11orf24Q96F05 449 aaPredicted RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 RYDENQ9NUL5 291 aaKnown RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 FBXO9Q9UK97 447 aaPredicted RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 SAMD4AQ9UPU9 718 aaKnown RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 PCDHGB1Q9Y5G3 927 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 RFXANKO14593 260 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 RIPK2O43353 540 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 LAMP2P13473 410 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 HNRNPH3P31942 346 aaKnown RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 CASRP41180 1078 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 CD86P42081 329 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 NR4A2P43354 598 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 MAGEA2P43356 314 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 PNLIPRP1P54315 467 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 CDH8P55286 799 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 SCN1BQ07699 218 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 ABCA11PQ4W5N1 156 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 NAIF1Q69YI7 327 aaPredicted RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 ZNF613Q6PF04 617 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 ZNF730Q6ZMV8 503 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 FRRS1Q6ZNA5 592 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 ZNF410Q86VK4 478 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 RAVER1Q8IY67 606 aaKnown RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 TMEM68Q96MH6 324 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 C7orf50Q9BRJ6 194 aaKnown RBP5.09□□□□□ -1.6
NF1-219ENST00000579081 SLC6A16Q9GZN6 736 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 ZNF639Q9UID6 485 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 BTRCQ9Y297 605 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 IFT52Q9Y366 437 aa5.09□□□□□ -1.6
NF1-219ENST00000579081 TP73O15350 636 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 IDSP22304 550 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 UQCRC1P31930 480 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 PLGLB1Q02325 96 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SP140Q13342 867 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 IL18Q14116 193 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SGCBQ16585 318 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 NRF1Q16656 503 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 KCTD19Q17RG1 926 aaPredicted RBP5.08□□□□□ -1.6
NF1-219ENST00000579081 UGT3A2Q3SY77 523 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 LBHQ53QV2 105 aaPredicted RBP5.08□□□□□ -1.6
NF1-219ENST00000579081 ZC3H12AQ5D1E8 599 aaKnown RBP5.08□□□□□ -1.6
NF1-219ENST00000579081 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.08□□□□□ -1.61e-6■■■■■ 30.9
NF1-219ENST00000579081 GPRIN3Q6ZVF9 776 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 DENND1CQ8IV53 801 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SVOPLQ8N434 492 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 CDYL2Q8N8U2 506 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 C12orf50Q8NA57 414 aaPredicted RBP5.08□□□□□ -1.6
NF1-219ENST00000579081 DNERQ8NFT8 737 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SMPDL3BQ92485 455 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 AKAP1Q92667 903 aaKnown RBP eCLIP5.08□□□□□ -1.6
NF1-219ENST00000579081 SPANXDQ9BXN6 97 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 COMMD4Q9H0A8 199 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 ABCG8Q9H221 673 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 FNIP2Q9P278 1114 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 IFT80Q9P2H3 777 aaPredicted RBP5.08□□□□□ -1.6
NF1-219ENST00000579081 FPGTO14772 594 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 KCNQ2O43526 872 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SLC25A14O95258 325 aaPredicted RBP5.08□□□□□ -1.6
NF1-219ENST00000579081 ADH1CP00326 375 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 PSMA1P25786 263 aaKnown RBP5.08□□□□□ -1.6
NF1-219ENST00000579081 GRIA3P42263 894 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 TROAPQ12815 778 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 GRB10Q13322 594 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 DSG2Q14126 1118 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 GFOD2Q3B7J2 385 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SLC9B1Q4ZJI4 515 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 ANKRD23Q86SG2 305 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 AKAP14Q86UN6 197 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 TREML1Q86YW5 311 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 ZZZ3Q8IYH5 903 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 MCOLN2Q8IZK6 566 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 MTURNQ8N3F0 131 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SLC16A10Q8TF71 515 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 COQ8BQ96D53 544 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 ENY2Q9NPA8 101 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 EQTNQ9NQ60 294 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SPATA31A3Q5VYP0 1347 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 PSMD9O00233 223 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 NUAK1O60285 661 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 PROCP04070 461 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 GYPCP04921 128 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SDC2P34741 201 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SF1Q15637 639 aaKnown RBP5.08□□□□□ -1.6
NF1-219ENST00000579081 LY6KQ17RY6 165 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 DUPD1Q68J44 220 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 KCNT2Q6UVM3 1135 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 NUP54Q7Z3B4 507 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 DNAJB14Q8TBM8 379 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 CKAP2Q8WWK9 683 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 TIFAQ96CG3 184 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 SLC47A1Q96FL8 570 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 RADILQ96JH8 1075 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 LMLNQ96KR4 655 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 BCORL1Q5H9F3 1711 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 TRBV23OR9-2A0A075B6M9 112 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 C22orf31O95567 290 aa5.08□□□□□ -1.6
NF1-219ENST00000579081 FGF19O95750 216 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms