RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 LILRB2Q8N423 598 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 FAM26EQ8N5C1 309 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CCDC185Q8N715 623 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 FAM46DQ8NEK8 389 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 JOSD2Q8TAC2 188 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 C9orf43Q8TAL5 461 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ABHD4Q8TB40 342 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 NELFBQ8WX92 580 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 DIO2Q92813 273 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ART4Q93070 314 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 SMARCE1Q969G3 411 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ISG20Q96AZ6 181 aaKnown RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 HMCESQ96FZ2 354 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 WDR92Q96MX6 357 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 PPP1R9BQ96SB3 815 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CMKLR1Q99788 373 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 DHRS4Q9BTZ2 278 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 G6PC3Q9BUM1 346 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 TTYH3Q9C0H2 523 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ADNPQ9H2P0 1102 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 SUDS3Q9H7L9 328 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 APMAPQ9HDC9 416 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 PCDH12Q9NPG4 1184 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 SPATS2LQ9NUQ6 558 aaKnown RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 TMEM248Q9NWD8 314 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 RMND1Q9NWS8 449 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 OCIAD1Q9NX40 245 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 SEPT10Q9P0V9 454 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 LRIT1Q9P2V4 623 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 PLEKHB1Q9UF11 243 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 ADAMTS6Q9UKP5 1117 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 STAP1Q9ULZ2 295 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 TP53TG5Q9Y2B4 290 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 PCYT1BQ9Y5K3 369 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 MRPS18BQ9Y676 258 aaKnown RBP3.95□□□□□ -1.78
PTPRM-206ENST00000578093 CROCCQ5TZA2 2017 aa3.95□□□□□ -1.78
PTPRM-206ENST00000578093 APCP25054 2843 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 RP1L1Q8IWN7 2480 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-206ENST00000578093 DCHS2Q6V1P9 2916 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 PDZD2O15018 2839 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 A0A1W2PQJ5 194 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 TLDC2A0PJX2 215 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 PRSS38A1L453 326 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 A1L4Q6 167 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 TMX2-CTNND1H3BSU7 103 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 PPM1DO15297 605 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 BUB1O43683 1085 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 NUDT21O43809 227 aaKnown RBP3.94□□□□□ -1.78
PTPRM-206ENST00000578093 NRDCO43847 1150 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 DLX3O60479 287 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 BUB1BO60566 1050 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-206ENST00000578093 RAMP2O60895 175 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 RECQL5O94762 991 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-206ENST00000578093 CPNE6O95741 557 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 EML2O95834 649 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 IGSF6O95976 241 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 TNFP01375 233 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 HSP90AA1P07900 732 aaKnown RBP3.94□□□□□ -1.78
PTPRM-206ENST00000578093 KRT7P08729 469 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 THRAP10827 490 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 SFTPCP11686 197 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 PNLIPP16233 465 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 GNLYP22749 145 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 F8A1P23610 371 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 CD1CP29017 333 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 CDH5P33151 784 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-206ENST00000578093 ARL4AP40617 200 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 GABRB2P47870 512 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 MAPKAPK2P49137 400 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 PEX5P50542 639 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 HDAC4P56524 1084 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 CORO7P57737 925 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 RHOAP61586 193 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 SNRPD1P62314 119 aaKnown RBP3.94□□□□□ -1.78
PTPRM-206ENST00000578093 NOMO3P69849 1222 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 SLC20A2Q08357 652 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 MTA1Q13330 715 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 MTM1Q13496 603 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 NR1D2Q14995 579 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 PTPRRQ15256 657 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 CYTH1Q15438 398 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 DEFB109BQ30KR1 87 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 TAF3Q5VWG9 929 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 RWDD4Q6NW29 188 aaKnown RBP3.94□□□□□ -1.78
PTPRM-206ENST00000578093 DPY19L2P1Q6NXN4 242 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 LVRNQ6Q4G3 990 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 LRRC31Q6UY01 552 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 CBLL1Q75N03 491 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 TAF8Q7Z7C8 310 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 TTC7BQ86TV6 843 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 TMEM135Q86UB9 458 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 HSCBQ8IWL3 235 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 NAGSQ8N159 534 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 PYROXD2Q8N2H3 581 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 BMPERQ8N8U9 685 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 OR6C4Q8NGE1 309 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 OR56A4Q8NGH8 313 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 FNIP1Q8TF40 1166 aa3.94□□□□□ -1.78
PTPRM-206ENST00000578093 STARD8Q92502 1023 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms