RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 PHACTR4Q8IZ21 702 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 RBFAQ8N0V3 343 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 OXR1Q8N573 874 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 NAT14Q8WUY8 206 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.47□□□□□ -1.05
NUP88-211ENST00000575976 PDXPQ96GD0 296 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 COPS8Q99627 209 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 BOCQ9BWV1 1114 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 OR2AG1Q9H205 316 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 GAREM1Q9H706 876 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 IL21RQ9HBE5 538 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 CYP4F12Q9HCS2 524 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 CATSPERZQ9NTU4 200 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 DNAJC28Q9NX36 388 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 VPS18Q9P253 973 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 SUFUQ9UMX1 484 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 SLC17A4Q9Y2C5 497 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.47□□□□□ -1.05
NUP88-211ENST00000575976 SETXQ7Z333 2677 aaKnown RBP8.47□□□□□ -1.05
NUP88-211ENST00000575976 GPR179Q6PRD1 2367 aa8.47□□□□□ -1.05
NUP88-211ENST00000575976 IGLV3-16A0A075B6K0 115 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 CDX4O14627 284 aaPredicted RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 NUAK1O60285 661 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 FAM153BP0C7A2 387 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 ERVK-10P10266 1014 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 NME1P15531 152 aaKnown RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 JUNDP17535 347 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 MSH3P20585 1137 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 TNFRSF8P28908 595 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 AKT1P31749 480 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 GNPDA1P46926 289 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 RXRGP48443 463 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 HK3P52790 923 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 CTSCP53634 463 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 ATXN3P54252 364 aaPredicted RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 GPX6P59796 221 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 VSNL1P62760 191 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 IL9RQ01113 521 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 C1orf61Q13536 156 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 GTF2H3Q13889 308 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 ITIH4Q14624 930 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 NAA30Q147X3 362 aaPredicted RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 FAM153CQ494X1 144 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 PYCR3Q53H96 274 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 HSP90AA5PQ58FG0 334 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 UBAP2Q5T6F2 1119 aaKnown RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 LYPLAL1Q5VWZ2 237 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 CERS6Q6ZMG9 384 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 CCNI2Q6ZMN8 369 aaPredicted RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 CEP128Q6ZU80 1094 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 C3orf62Q6ZUJ4 267 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 DET1Q7L5Y6 550 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 KCNMB4Q86W47 210 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 DENND6AQ8IWF6 608 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 MINDY1Q8N5J2 469 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 OTUD6BQ8N6M0 293 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 RASGEF1AQ8N9B8 481 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 EIF1ADQ8N9N8 165 aaKnown RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 GPR150Q8NGU9 434 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 GSDMBQ8TAX9 411 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 SGF29Q96ES7 293 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 CERS2Q96G23 380 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 DCUN1D1Q96GG9 259 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 SCARF2Q96GP6 870 aaPredicted RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 TTC25Q96NG3 672 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 TTC1Q99614 292 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 EDEM2Q9BV94 578 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 RMI1Q9H9A7 625 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 CARS2Q9HA77 564 aaKnown RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 LRRC4CQ9HCJ2 640 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 IARS2Q9NSE4 1012 aaKnown RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 NINJ2Q9NZG7 142 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 APOBEC3BQ9UH17 382 aaKnown RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 ZNHIT2Q9UHR6 403 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 PRKAB1Q9Y478 270 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 GPSM3Q9Y4H4 160 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 PRSS21Q9Y6M0 314 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 DGKBQ9Y6T7 804 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 ZNF106Q9H2Y7 1883 aaKnown RBP8.46□□□□□ -1.06
NUP88-211ENST00000575976 PCDH15Q96QU1 1955 aa8.46□□□□□ -1.06
NUP88-211ENST00000575976 OR2AG2A6NM03 316 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CFAP99D6REC4 459 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 H3BM21 787 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CHUKO15111 745 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 GRID2O43424 1007 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 SGTAO43765 313 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 GDF9O60383 454 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 OR1I1O60431 355 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 DFNA5O60443 496 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 SDC3O75056 442 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 NDUFS3O75489 264 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 PIAS2O75928 621 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CER1O95813 267 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CELA2BP08218 269 aaPredicted RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 F7P08709 466 aaPredicted RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 GSTA2P09210 222 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 RALBP11234 206 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 CTSEP14091 401 aa8.45□□□□□ -1.06
NUP88-211ENST00000575976 ATP1B2P14415 290 aaPredicted RBP8.45□□□□□ -1.06
NUP88-211ENST00000575976 OGNP20774 298 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms