RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 NAT8LQ8N9F0 302 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 GPR26Q8NDV2 337 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 BLOC1S5Q8TDH9 187 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 SCARF2Q96GP6 870 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-225ENST00000569245 ATXN7L3BQ96GX2 97 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 MRGPRX2Q96LB1 330 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 GFM1Q96RP9 751 aaKnown RBP14.33□□□□□ -0.12
COMMD4-225ENST00000569245 ZSCAN5AQ9BUG6 496 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 TRABDQ9H4I3 376 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 ARFGAP3Q9NP61 516 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 EIF2B3Q9NR50 452 aaKnown RBP14.33□□□□□ -0.12
COMMD4-225ENST00000569245 RABGEF1Q9UJ41 708 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 ANAPC5Q9UJX4 755 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 OAS3Q9Y6K5 1087 aaKnown RBP14.33□□□□□ -0.12
COMMD4-225ENST00000569245 RNF215Q9Y6U7 377 aa14.33□□□□□ -0.12
COMMD4-225ENST00000569245 ERI2A8K979 691 aaKnown RBP14.32□□□□□ -0.12
COMMD4-225ENST00000569245 CASC3O15234 703 aaKnown RBP14.32□□□□□ -0.12
COMMD4-225ENST00000569245 BRINP1O60477 761 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 BPIP17213 487 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 HLA-DPA1P20036 260 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 PSMB4P28070 264 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 PLTPP55058 493 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 MAZP56270 477 aaKnown RBP14.32□□□□□ -0.12
COMMD4-225ENST00000569245 GABREP78334 506 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 LRP8Q14114 963 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 HLTFQ14527 1009 aaKnown RBP eCLIP14.32□□□□□ -0.12
COMMD4-225ENST00000569245 BRD3Q15059 726 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 FOXR1Q6PIV2 292 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 CHST15Q7LFX5 561 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-225ENST00000569245 TRAM1L1Q8N609 369 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 MCUQ8NE86 351 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 FBXO25Q8TCJ0 367 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 GRAMD1AQ96CP6 724 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 GORASP1Q9BQQ3 440 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 FICDQ9BVA6 458 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 FOXP3Q9BZS1 431 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 OR2AG1Q9H205 316 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 LRRN3Q9H3W5 708 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 VPS18Q9P253 973 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 NFU1Q9UMS0 254 aa14.32□□□□□ -0.12
COMMD4-225ENST00000569245 AAR2Q9Y312 384 aaKnown RBP14.32□□□□□ -0.12
COMMD4-225ENST00000569245 DSPP15924 2871 aaKnown RBP14.32□□□□□ -0.12
COMMD4-225ENST00000569245 ANKRD11Q6UB99 2663 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-225ENST00000569245 CFAP47Q6ZTR5 3102 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 TRBV23OR9-2A0A075B6M9 112 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 PSMD3O43242 534 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 ZW10O43264 779 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 NUDT21O43809 227 aaKnown RBP14.31□□□□□ -0.12
COMMD4-225ENST00000569245 AGTP01019 485 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 MYBL2P10244 700 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 PNLIPP16233 465 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 ALDH4A1P30038 563 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 HMGCLP35914 325 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 DCDC1P59894 354 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 CDK16Q00536 496 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 CBLBQ13191 982 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 C3orf38Q5JPI3 329 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 ZNF648Q5T619 568 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-225ENST00000569245 ANKRD22Q5VYY1 191 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 KCTD11Q693B1 232 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 GLT6D1Q7Z4J2 308 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 ARL14Q8N4G2 192 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 TAB3Q8N5C8 712 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-225ENST00000569245 GDAP1Q8TB36 358 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 GLYATL1Q969I3 302 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 RMI1Q9H9A7 625 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 POLR1BQ9H9Y6 1135 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 TRIM39Q9HCM9 518 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 HACD3Q9P035 362 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 ATXN10Q9UBB4 475 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 MTRF1LQ9UGC7 380 aaKnown RBP14.31□□□□□ -0.12
COMMD4-225ENST00000569245 APPL1Q9UKG1 709 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 SATB2Q9UPW6 733 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 PKP3Q9Y446 797 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 ENTPD2Q9Y5L3 495 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 ST14Q9Y5Y6 855 aa14.31□□□□□ -0.12
COMMD4-225ENST00000569245 TCRBV7S3A2A0A539 114 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 CCDC151A5D8V7 595 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 E7EVH7 732 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 NTN3O00634 580 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-225ENST00000569245 GRID2O43424 1007 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 BUD23O43709 281 aaKnown RBP14.3□□□□□ -0.12
COMMD4-225ENST00000569245 SNX2O60749 519 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 DNAJC6O75061 913 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 TMEM63AO94886 807 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 SUN1O94901 812 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 APRTP07741 180 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 ACP5P13686 325 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 ZNF8P17098 575 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-225ENST00000569245 RBMS1P29558 406 aaKnown RBP14.3□□□□□ -0.12
COMMD4-225ENST00000569245 LSSP48449 732 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 PPM1FP49593 454 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-225ENST00000569245 AMZ1Q400G9 498 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 ZDHHC20Q5W0Z9 365 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 PDPK2PQ6A1A2 396 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 C19orf48Q6RUI8 117 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 SPRED1Q7Z699 444 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 PHYKPLQ8IUZ5 450 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 LSMEM2Q8N112 164 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms