RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 RARRES3Q9UL19 164 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 NOTCH2Q04721 2471 aa10.33□□□□□ -0.76
CDC42BPB-207ENST00000560492 SHANK1Q9Y566 2161 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 CREBBPQ92793 2442 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 OR52A4PA6NMU1 304 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 C21orf140B9A014 251 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 TOX3O15405 576 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 MFSD11O43934 449 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 FZD6O60353 706 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 RARAP10276 462 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 TCF4P15884 667 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 XRCC1P18887 633 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 CES1P23141 567 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 PCK1P35558 622 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 SLC19A1P41440 591 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 HALP42357 657 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 CAPZBP47756 277 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 DRG2P55039 364 aaKnown RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 GALNT3Q14435 633 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 KCNAB1Q14722 419 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 PLCL1Q15111 1095 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 HENMT1Q5T8I9 393 aaKnown RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF787Q6DD87 383 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 FAM199XQ6PEV8 388 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 LRRTM4Q86VH4 590 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 APLFQ8IW19 511 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 GDAP1Q8TB36 358 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 MR1Q95460 341 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 ERGIC2Q96RQ1 377 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 RUFY1Q96T51 708 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 HAUS4Q9H6D7 363 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 PCDH18Q9HCL0 1135 aa10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 SCHIP1Q9P0W5 487 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 LIMA1Q9UHB6 759 aaKnown RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 TSR3Q9UJK0 312 aaKnown RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 CNOT6Q9ULM6 557 aaKnown RBP10.32□□□□□ -0.76
CDC42BPB-207ENST00000560492 MED13Q9UHV7 2174 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 A6NL46 340 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 LRRC53A6NM62 1247 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 KMOO15229 486 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 MTX2O75431 263 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 TIAF1O95411 115 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 FGF5P12034 268 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF7P17097 686 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 VCLP18206 1134 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 IDSP22304 550 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 COL8A1P27658 744 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 CD86P42081 329 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 RPL26P61254 145 aaKnown RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 MYL5Q02045 173 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 KLHL30Q0D2K2 578 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 MRPL49Q13405 166 aaKnown RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 GTF2H3Q13889 308 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 GPR18Q14330 331 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 INPP5JQ15735 1006 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 CHRNA6Q15825 494 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 IFI16Q16666 785 aaKnown RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 PRR30Q53SZ7 412 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 SASS6Q6UVJ0 657 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 PRSS42Q7Z5A4 293 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 IRF2BP2Q7Z5L9 587 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 PACS2Q86VP3 889 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 TRAPPC5Q8IUR0 188 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 TMEM126BQ8IUX1 230 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 LRRC49Q8IUZ0 686 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 TEX26Q8N6G2 289 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 AOPEPQ8N6M6 819 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 CCNYQ8ND76 341 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 LRRN4Q8WUT4 740 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 THAP4Q8WY91 577 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 TTC25Q96NG3 672 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 WDR24Q96S15 920 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 ADGRE3Q9BY15 652 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 GPR63Q9BZJ6 419 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 BRD8Q9H0E9 1235 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 ING2Q9H160 280 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 UCK1Q9HA47 277 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 TRIM39Q9HCM9 518 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 POT1Q9NUX5 634 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 CUEDC1Q9NWM3 386 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF624Q9P2J8 865 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 RPL26L1Q9UNX3 145 aaKnown RBP10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 SHOC2Q9UQ13 582 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF451Q9Y4E5 1061 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 PCDHGA6Q9Y5G7 932 aa10.31□□□□□ -0.76
CDC42BPB-207ENST00000560492 UBA6A0AVT1 1052 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF185O15231 689 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 MATN3O15232 486 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 DPM1O60762 260 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 CDK14O94921 469 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 DDAH2O95865 285 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 HLA-DQB2P05538 268 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 PIRTP0C851 137 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 EBLN1P0CF75 366 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 RNF224P0DH78 156 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 MYBL1P10243 752 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 NELFEP18615 380 aaKnown RBP10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 IL4RP24394 825 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 PTPN4P29074 926 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms