RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 GBE1Q04446 702 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 GTF2H3Q13889 308 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.24■□□□□ 0.03
NEDD1-207ENST00000555114 CACHD1Q5VU97 1274 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 HGSNATQ68CP4 663 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 ALKBH5Q6P6C2 394 aaKnown RBP15.24■□□□□ 0.03
NEDD1-207ENST00000555114 CLEC18BQ6UXF7 455 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 ASB18Q6ZVZ8 466 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 CLEC18CQ8NCF0 446 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 FAF2Q96CS3 445 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 ELMO2Q96JJ3 720 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 NAP1L5Q96NT1 182 aaPredicted RBP15.24■□□□□ 0.03
NEDD1-207ENST00000555114 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
NEDD1-207ENST00000555114 TWSG1Q9GZX9 223 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 MAGEE1Q9HCI5 957 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 SCHIP1Q9P0W5 487 aaPredicted RBP15.24■□□□□ 0.03
NEDD1-207ENST00000555114 CTTNBP2NLQ9P2B4 639 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 PCDHGA6Q9Y5G7 932 aa15.24■□□□□ 0.03
NEDD1-207ENST00000555114 PIPSLA2A3N6 862 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 GOLGA6L3A6NEY3 463 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 C21orf140B9A014 251 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 KCNK1O00180 336 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 SPAG6O75602 509 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 CREG1O75629 220 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 PROSCO94903 275 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 CDK14O94921 469 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 MMP2P08253 660 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 LEPRP48357 1165 aaKnown RBP15.23■□□□□ 0.03
NEDD1-207ENST00000555114 CD97P48960 835 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 PMS2P54278 862 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 SH3BP2P78314 561 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 IFI35P80217 286 aaPredicted RBP15.23■□□□□ 0.03
NEDD1-207ENST00000555114 PPIDQ08752 370 aaKnown RBP15.23■□□□□ 0.03
NEDD1-207ENST00000555114 DNASE1L3Q13609 305 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 NR1I3Q14994 352 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 ATP13A4Q4VNC1 1196 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 ZNF648Q5T619 568 aaPredicted RBP15.23■□□□□ 0.03
NEDD1-207ENST00000555114 AGAP9Q5VTM2 703 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 IRGCQ6NXR0 463 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 KLHL35Q6PF15 583 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 ABRAXAS1Q6UWZ7 409 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 WASH2PQ6VEQ5 465 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 TMC3Q7Z5M5 1100 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 NT5DC3Q86UY8 548 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 EFCAB3Q8N7B9 438 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 GPR26Q8NDV2 337 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.23■□□□□ 0.03
NEDD1-207ENST00000555114 TTC25Q96NG3 672 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 CBX8Q9HC52 389 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 LRRC4CQ9HCJ2 640 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 WASH6PQ9NQA3 447 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 ZNF624Q9P2J8 865 aaPredicted RBP15.23■□□□□ 0.03
NEDD1-207ENST00000555114 UVRAGQ9P2Y5 699 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 EPHA6Q9UF33 1036 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 SHOC2Q9UQ13 582 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 ZNF711Q9Y462 761 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 SLC30A1Q9Y6M5 507 aa15.23■□□□□ 0.03
NEDD1-207ENST00000555114 NBASA2RRP1 2371 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 A0A087X0T9 212 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 MTSS1O43312 755 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 KCNJ13O60928 360 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 VPS4BO75351 444 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 FAM228BP0C875 321 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 RPL10P27635 214 aaKnown RBP15.22■□□□□ 0.03
NEDD1-207ENST00000555114 ZBED6P86452 979 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 AP1B1Q10567 949 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 GPR18Q14330 331 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 FAM92BQ6ZTR7 304 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 BPHLQ86WA6 291 aaPredicted RBP15.22■□□□□ 0.03
NEDD1-207ENST00000555114 TRAPPC5Q8IUR0 188 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 PQLC3Q8N755 202 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 GDAP1Q8TB36 358 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 BRSK1Q8TDC3 778 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 LRRN4Q8WUT4 740 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 CTNNBL1Q8WYA6 563 aaPredicted RBP15.22■□□□□ 0.03
NEDD1-207ENST00000555114 KLHL6Q8WZ60 621 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 UBXN4Q92575 508 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 RSC1A1Q92681 617 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 FCRL4Q96PJ5 515 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
NEDD1-207ENST00000555114 RAB33BQ9H082 229 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 SLC40A1Q9NP59 571 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 LHX9Q9NQ69 397 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 SLC23A2Q9UGH3 650 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 RARRES3Q9UL19 164 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 VPS4AQ9UN37 437 aa15.22■□□□□ 0.03
NEDD1-207ENST00000555114 LRRK2Q5S007 2527 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 PPP1R12AO14974 1030 aaPredicted RBP15.21■□□□□ 0.03
NEDD1-207ENST00000555114 H2AFZP0C0S5 128 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 PIRTP0C851 137 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 NELFEP18615 380 aaKnown RBP15.21■□□□□ 0.03
NEDD1-207ENST00000555114 NR1D1P20393 614 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 TNNT3P45378 269 aaPredicted RBP15.21■□□□□ 0.03
NEDD1-207ENST00000555114 ARL4DP49703 201 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 PDE1BQ01064 536 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 ACY1Q03154 408 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 CDK18Q07002 472 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 ZBTB17Q13105 803 aa15.21■□□□□ 0.03
NEDD1-207ENST00000555114 TUBB3Q13509 450 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms