RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 GIT2Q14161 759 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 LIN52Q52LA3 116 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 ZDHHC17Q8IUH5 632 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 SLC2A14Q8TDB8 520 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 RFKQ969G6 155 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 MKL1Q969V6 931 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 C16orf58Q96GQ5 468 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 TM6SF2Q9BZW4 377 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 OSER1Q9NX31 292 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 ADAM28Q9UKQ2 775 aa13.58□□□□□ -0.23
LRRK1-202ENST00000525284 ISPDA4D126 451 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF20P17024 532 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 NT5EP21589 574 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 LUMP51884 338 aaPredicted RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 PLEKHG4Q58EX7 1191 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CHSY3Q70JA7 882 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 DNAJB7Q7Z6W7 309 aaPredicted RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 PAQR7Q86WK9 346 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 RIPOR3Q96MK2 946 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 GMIPQ9P107 970 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 PCDHGB5Q9Y5G0 923 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 UMODL1Q5DID0 1318 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CHADO15335 359 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 YES1P07947 543 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SCGB2A2Q13296 93 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SEMA3AQ14563 771 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CDK10Q15131 360 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 GCNT6Q5T4J0 391 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 GARNL3Q5VVW2 1013 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SV2AQ7L0J3 742 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 KCTD9Q7L273 389 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 KLHL15Q96M94 604 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF717Q9BY31 904 aaPredicted RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SMPD3Q9NY59 655 aaPredicted RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 PLEKHA6Q9Y2H5 1048 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 APOC4-APOC2K7ER74 178 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 PDPK1O15530 556 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 TULP3O75386 442 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 AKAP3O75969 853 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 APOC2P02655 101 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CTPS1P17812 591 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SLC6A3Q01959 620 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 RPA4Q13156 261 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CBLBQ13191 982 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 OR2T34Q8NGX1 318 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 OR2T3Q8NH03 318 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 DPP7Q9UHL4 492 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 RAB26Q9ULW5 256 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 PCDHGC5Q9Y5F6 944 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 KCNE2Q9Y6J6 123 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 AP1M2Q9Y6Q5 423 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 EPHB6O15197 1021 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 IGKV5-2P06315 115 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CCNB1P14635 433 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 AXLP30530 894 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 ACSL1P33121 698 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CCR10P46092 362 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF792Q3KQV3 632 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SLC9B1Q4ZJI4 515 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SLC22A15Q8IZD6 547 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 TMEM161BQ8NDZ6 487 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 MFSD8Q8NHS3 518 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 HOPXQ9BPY8 73 aaPredicted RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 RNF121Q9H920 327 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 ARL8BQ9NVJ2 186 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SLC39A1Q9NY26 324 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 ZNF490Q9ULM2 529 aaPredicted RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 MRPS33Q9Y291 106 aaKnown RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 IFT52Q9Y366 437 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 RFX7Q2KHR2 1363 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 DHX15O43143 795 aaKnown RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 SLC35G4P0C7Q5 338 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CD247P20963 164 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 ITPKAP23677 461 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CDH8P55286 799 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 ILF3Q12906 894 aaKnown RBP eCLIP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CTBP1Q13363 440 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CLEC17AQ6ZS10 378 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 YTHDF3Q7Z739 585 aaKnown RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 TMED4Q7Z7H5 227 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 HJURPQ8NCD3 748 aaPredicted RBP13.58□□□□□ -0.24
LRRK1-202ENST00000525284 OR4C6Q8NH72 309 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 LRRN4Q8WUT4 740 aa13.58□□□□□ -0.24
LRRK1-202ENST00000525284 CNTNAP5Q8WYK1 1306 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 SNRPD1P62314 119 aaKnown RBP13.57□□□□□ -0.24
LRRK1-202ENST00000525284 PTPAQ15257 358 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 PDK4Q16654 411 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 TBC1D25Q3MII6 688 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 PPP1R15BQ5SWA1 713 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 CCNYL2Q5T2Q4 361 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 ARCQ7LC44 396 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 NAXEQ8NCW5 288 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 PIGXQ8TBF5 258 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 BDNFP23560 247 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 SH3D19Q5HYK7 790 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 NKX2-3Q8TAU0 364 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 SLC6A4P31645 630 aa13.57□□□□□ -0.24
LRRK1-202ENST00000525284 CDH12P55289 794 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms