RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 K7EQS6 105 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 MPHOSPH10O00566 681 aaKnown RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 CLDN4O14493 209 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 AP3D1O14617 1153 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 SCAMP1O15126 338 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 NVLO15381 856 aaKnown RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 PRAMEF10O60809 474 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 PRB2P02812 416 aaPredicted RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 APOA4P06727 396 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 CSF1P09603 554 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 XRCC6P12956 609 aaKnown RBP eCLIP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 HGFP14210 728 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 GABRG2P18507 467 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 TGM2P21980 687 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 CALRP27797 417 aaKnown RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 ABCD3P28288 659 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 AKT1P31749 480 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 MCM7P33993 719 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 UGT1A5P35504 534 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 GLUD2P49448 558 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 DPTQ07507 201 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 FOXM1Q08050 763 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 GALNT2Q10471 571 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 CDC20Q12834 499 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 GCKRQ14397 625 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 KCNAB1Q14722 419 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 INSCQ1MX18 579 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 BTBD16Q32M84 506 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 Q5PR19 223 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 STXBP5Q5T5C0 1151 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 FCRL6Q6DN72 434 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 MRNIPQ6NTE8 343 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 RAB11FIP2Q7L804 512 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 ZSCAN30Q86W11 494 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 FITM2Q8N6M3 262 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 ALLCQ8N6M5 410 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 AOPEPQ8N6M6 819 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 PPTC7Q8NI37 304 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 CUL5Q93034 780 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 GRAMD1AQ96CP6 724 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 RMND5BQ96G75 393 aaPredicted RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 VMP1Q96GC9 406 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 MARS2Q96GW9 593 aaKnown RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 MED15Q96RN5 788 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 PPP1R9BQ96SB3 815 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 BAG1Q99933 345 aaPredicted RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 GPATCH1Q9BRR8 931 aaKnown RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 SERHL2Q9H4I8 314 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 RETREG1Q9H6L5 497 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 ZDHHC4Q9NPG8 344 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 G6PC2Q9NQR9 355 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 RNF146Q9NTX7 359 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 MRPS18AQ9NVS2 196 aaKnown RBP3.17□□□□□ -1.9
CSDE1-209ENST00000525132 FOXJ2Q9P0K8 574 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 AGAP1Q9UPQ3 857 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 NFE2L3Q9Y4A8 694 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 RP1P56715 2156 aa3.17□□□□□ -1.9
CSDE1-209ENST00000525132 CACNA1CQ13936 2221 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 MYO7BQ6PIF6 2116 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 CCDC187A0A096LP49 1063 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 A0A1B0GVM2 712 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 hCG_1807616A0A1W2PRN6 198 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 AQP7P3A6NL99 342 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 EFCAB8A8MWE9 144 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 STX16-NPEPL1H3BU86 382 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 H7C0S8 307 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 M0QYG6 137 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 STX16O14662 325 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PCDH17O14917 1159 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 CCNT2O60583 730 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 MOSPD3O75425 235 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 ERN1O75460 977 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 SUN1O94901 812 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 ZWINTO95229 277 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 CPA1P15085 419 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PORP16435 677 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 FDXRP22570 491 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PGM1P36871 562 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 UBA7P41226 1012 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PAFAH1B1P43034 410 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PTDSS1P48651 473 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 COMPP49747 757 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 VAV2P52735 878 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 ZNF135P52742 658 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 IFI35P80217 286 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 CDC16Q13042 620 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 MAMLD1Q13495 774 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 TP53BP2Q13625 1128 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 RUNX3Q13761 415 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 BECN1Q14457 450 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 GPR68Q15743 365 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 PLA1AQ53H76 456 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 CCDC92Q53HC0 331 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 TTC39AQ5SRH9 613 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 UTP14CQ5TAP6 766 aaKnown RBP3.16□□□□□ -1.9
CSDE1-209ENST00000525132 SNX30Q5VWJ9 437 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 FAM160B1Q5W0V3 765 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 CES4AQ5XG92 561 aa3.16□□□□□ -1.9
CSDE1-209ENST00000525132 XKRXQ6PP77 449 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms