RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 FAM83EQ2M2I3 478 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 TMEM52BQ4KMG9 183 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 TRIM61Q5EBN2 209 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 AGAP9Q5VTM2 703 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 LYSMD4Q5XG99 296 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 EGFLAMQ63HQ2 1017 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 ZNF776Q68DI1 518 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 LRRC8EQ6NSJ5 796 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 KLC3Q6P597 504 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 LVRNQ6Q4G3 990 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 IL27RAQ6UWB1 636 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 ERN2Q76MJ5 926 aaKnown RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 TBC1D1Q86TI0 1168 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 TRAM1L1Q8N609 369 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 ANKRD42Q8N9B4 389 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 PIGKQ92643 395 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 EID2BQ96D98 161 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 CCDC126Q96EE4 140 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 ELMO2Q96JJ3 720 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 UBXN10Q96LJ8 280 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 ZNF317Q96PQ6 595 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 VPS35Q96QK1 796 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 HHIPQ96QV1 700 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 OMDQ99983 421 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 P2RY12Q9H244 342 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 SYTL2Q9HCH5 934 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 FBXO6Q9NRD1 293 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-228ENST00000511676 LATS2Q9NRM7 1088 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 PCMTD2Q9NV79 361 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 SIRPGQ9P1W8 387 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 SLC17A6Q9P2U8 582 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 MYLKQ15746 1914 aa9.03□□□□□ -0.96
NR1I3-228ENST00000511676 GOLGA8TH3BQL2 631 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 KPNA3O00505 521 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 TSPAN6O43657 245 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 BNIP3LO60238 219 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 SYNCRIPO60506 623 aaKnown RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 SPAG7O75391 227 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 VPS26AO75436 327 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 AP2A2O94973 939 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 KLHL2O95198 593 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 PROCP04070 461 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 RBP1P09455 135 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 C1SP09871 688 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ELFN1P0C7U0 828 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 CDK4P11802 303 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ADRB3P13945 408 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 PKMP14618 531 aaKnown RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 GRK2P25098 689 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ACRV1P26436 265 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 TEAD1P28347 426 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 SERPINB5P36952 375 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 NSG1P42857 185 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 SERPINB4P48594 390 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 TAS2R39P59534 338 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 DPTQ07507 201 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 RALGDSQ12967 914 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 SRSF5Q13243 272 aaKnown RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ACAP2Q15057 778 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 CST6Q15828 149 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 C2orf27AQ580R0 203 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ZRANB3Q5FWF4 1079 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 HENMT1Q5T8I9 393 aaKnown RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 HECTD2Q5U5R9 776 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ATG16L1Q676U5 607 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ANO7Q6IWH7 933 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 FBXL19Q6PCT2 694 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 CNSTQ6PJW8 725 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 MACC1Q6ZN28 852 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 RAPH1Q70E73 1250 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 TECPR1Q7Z6L1 1165 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 TTC7BQ86TV6 843 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 PIANPQ8IYJ0 282 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 CHPFQ8IZ52 775 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 KIRREL3Q8IZU9 778 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 NXPE1Q8N323 547 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 NKAPQ8N5F7 415 aaKnown RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 GPATCH11Q8N954 259 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 OR2T3Q8NH03 318 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 RHEBL1Q8TAI7 183 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 MDM1Q8TC05 714 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ZNF398Q8TD17 642 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 SKA1Q96BD8 255 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 PDLIM5Q96HC4 596 aaKnown RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 COQ10AQ96MF6 247 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 BIRC8Q96P09 236 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 FAM111AQ96PZ2 611 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 MRPL57Q9BQC6 102 aaKnown RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 TSSK1BQ9BXA7 367 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 CLPBQ9H078 707 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 KDM4CQ9H3R0 1056 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 FAM83DQ9H4H8 585 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 SUDS3Q9H7L9 328 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-228ENST00000511676 ZDHHC3Q9NYG2 299 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 GNPTGQ9UJJ9 305 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 HCN2Q9UL51 889 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 TMCO1Q9UM00 188 aa9.02□□□□□ -0.97
NR1I3-228ENST00000511676 APOBEC2Q9Y235 224 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms