RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-209	ENST00000511009	ZNF75D	P51815	510 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	CAPZA1	P52907	286 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	NUDT6	P53370	316 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	POLG	P54098	1239 aa	Predicted RBP	4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	TAS2R38	P59533	333 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	PPAT	Q06203	517 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	SCN1B	Q07699	218 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	SRSF4	Q08170	494 aa	Known RBP	4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	HSPB3	Q12988	150 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	MVP	Q14764	893 aa	Known RBP	4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	EFNB3	Q15768	340 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	EZH2	Q15910	746 aa	Known RBP	4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	MYLK3	Q32MK0	819 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	KCNT1	Q5JUK3	1230 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	SUSD1	Q6UWL2	747 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	PPP1R21	Q6ZMI0	780 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	GPR180	Q86V85	440 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	TMEM173	Q86WV6	379 aa	Predicted RBP	4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	ZNF575	Q86XF7	245 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	PCDH20	Q8N6Y1	951 aa	Known RBP	4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	NANOGP1	Q8N7R0	232 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	TBC1D16	Q8TBP0	767 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	ADAMTS14	Q8WXS8	1223 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	RND1	Q92730	232 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	SLC25A28	Q96A46	364 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	TXNDC15	Q96J42	360 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	CCDC114	Q96M63	670 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	ZNF558	Q96NG5	402 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	MS4A10	Q96PG2	267 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	NEK1	Q96PY6	1258 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	MGME1	Q9BQP7	344 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	PPIL3	Q9H2H8	161 aa	Known RBP	4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	TRMT1	Q9NXH9	659 aa	Known RBP	4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	STK26	Q9P289	416 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	B3GALT5	Q9Y2C3	310 aa		4.63	□□□□□ -1.67
MBD4-209	ENST00000511009	TMEM189-UBE2V1	I3L0A0	370 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009		J3QR06	171 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	KCNN4	O15554	427 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	SLC7A4	O43246	635 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	ZNF217	O75362	1048 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	CH25H	O95992	272 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	ACHE	P22303	614 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	FASLG	P48023	281 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	BMX	P51813	675 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	HNRNPH2	P55795	449 aa	Known RBP	4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	NANOS3	P60323	173 aa	Known RBP	4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	TRAF1	Q13077	416 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	UBE2V1	Q13404	147 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	DECR1	Q16698	335 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	ODF2	Q5BJF6	829 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	FNBP1L	Q5T0N5	605 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	PXDC1	Q5TGL8	231 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	DLK2	Q6UY11	383 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	CCAR2	Q8N163	923 aa	Known RBP	4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	NUP93	Q8N1F7	819 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	SLC4A11	Q8NBS3	891 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	MSANTD4	Q8NCY6	345 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	WDR20	Q8TBZ3	569 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	TAS1R2	Q8TE23	839 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	UTP15	Q8TED0	518 aa	Known RBP	4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	PPP4R1	Q8TF05	950 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	OIT3	Q8WWZ8	545 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	TAAR8	Q969N4	342 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	ARSG	Q96EG1	525 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	TMEM79	Q9BSE2	394 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	PLAC1	Q9HBJ0	212 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	FBXL2	Q9UKC9	423 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	FZD10	Q9ULW2	581 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	KLHL20	Q9Y2M5	609 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	LOXL2	Q9Y4K0	774 aa		4.62	□□□□□ -1.67
MBD4-209	ENST00000511009	IGHV4-28	A0A0C4DH34	117 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	hDV102S1	A0JD36	115 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	BECN2	A8MW95	431 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	ANKRD28	O15084	1053 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	SYNCRIP	O60506	623 aa	Known RBP	4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	TSPAN1	O60635	241 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	NDUFS7	O75251	213 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	CREG1	O75629	220 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	CELF2	O95319	508 aa	Known RBP	4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	CELA2A	P08217	269 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	TCEA1	P23193	301 aa	Known RBP	4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	HRH2	P25021	359 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	C21orf33	P30042	268 aa	Predicted RBP	4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	GABRA5	P31644	462 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	APOBEC1	P41238	236 aa	Known RBP	4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	KCNJ4	P48050	445 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	PTK6	Q13882	451 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	HNF4G	Q14541	408 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	PTPRCAP	Q14761	206 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	AMZ1	Q400G9	498 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	ATP13A5	Q4VNC0	1218 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	MTX3	Q5HYI7	312 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	MORN5	Q5VZ52	161 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	ALS2CL	Q60I27	953 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	PLA2G4F	Q68DD2	849 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	RGMB	Q6NW40	437 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	WDR73	Q6P4I2	378 aa		4.61	□□□□□ -1.67
MBD4-209	ENST00000511009	ZBTB49	Q6ZSB9	765 aa		4.61	□□□□□ -1.67

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