RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 SP1P08047 785 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 KRT19P08727 400 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 ACADMP11310 421 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 PSMA4P25789 261 aaKnown RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 TIMP3P35625 211 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 ARL3P36405 182 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 MSH2P43246 934 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 CAMPP49913 170 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 CDH8P55286 799 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 GEMIN4P57678 1058 aaKnown RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 PSMC6P62333 389 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 TROAPQ12815 778 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 IKQ13123 557 aaPredicted RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 UBE2V1Q13404 147 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 MAMLD1Q13495 774 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 PDE1CQ14123 709 aaPredicted RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 ADIPOQQ15848 244 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 RAB6CQ53S08 254 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 JADE1Q6IE81 842 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 SLC26A9Q7LBE3 791 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 PIWIL4Q7Z3Z4 852 aaKnown RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 RNF168Q8IYW5 571 aaPredicted RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 ZNF843Q8N446 348 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 GBGT1Q8N5D6 347 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 DMBX1Q8NFW5 382 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 OXNAD1Q96HP4 312 aaPredicted RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 RAB6CQ9H0N0 254 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 SEMA6AQ9H2E6 1030 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 EIF2B3Q9NR50 452 aaKnown RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 TCP11L1Q9NUJ3 509 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 HCFC1R1Q9NWW0 138 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 MARCH4Q9P2E8 410 aaPredicted RBP3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 FBXW11Q9UKB1 542 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 NENFQ9UMX5 172 aa3.29□□□□□ -1.88
CDC42SE2-210ENST00000506929 SMCHD1A6NHR9 2005 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 A0A1W2PS18 150 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 MYO1GB0I1T2 1018 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 PTGES3LE9PB15 166 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 CFC1BP0CG36 223 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 CFC1P0CG37 223 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 GM2AP17900 193 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 TCEA1P23193 301 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 IL15P40933 162 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 GPR143P51810 404 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 PLIN5Q00G26 463 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 PRKAA1Q13131 559 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 GFI1BQ5VTD9 330 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 ACSM2BQ68CK6 577 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 C19orf48Q6RUI8 117 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 KLHDC8BQ8IXV7 354 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 EMC1Q8N766 993 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 SLC38A9Q8NBW4 561 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 KCNH5Q8NCM2 988 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 THAP6Q8TBB0 222 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 NR4A3Q92570 626 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 PHF21AQ96BD5 680 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 SLX1AQ9BQ83 275 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 PELI2Q9HAT8 420 aa3.28□□□□□ -1.88
CDC42SE2-210ENST00000506929 TEX13DA0A0J9YY54 714 aaPredicted RBP3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 TMEM8BA6NDV4 472 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 AP3D1O14617 1153 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 SMAD9O15198 467 aaKnown RBP3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 SH3BP5O60239 455 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 CTSVO60911 334 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 SCGB1D1O95968 90 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 AMBPP02760 352 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 NMBRP28336 390 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 MMP14P50281 582 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 MBTD1Q05BQ5 628 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 FAM205BPQ63HN1 556 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 ZNF449Q6P9G9 518 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 NFE4Q86UQ8 179 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 DCUN1D3Q8IWE4 304 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 PM20D2Q8IYS1 436 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 SLC5A8Q8N695 610 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 LMNTD1Q8N9Z9 388 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 TRPC4APQ8TEL6 797 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 SCFD2Q8WU76 684 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 TMEM255BQ8WV15 326 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 ZFAND2BQ8WV99 257 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 DDOQ99489 341 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 EPYCQ99645 322 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 GHITMQ9H3K2 345 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 MAGIXQ9H6Y5 334 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 SH2D4AQ9H788 454 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 OGFRQ9NZT2 677 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 MTMR6Q9Y217 621 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 CMAHPQ9Y471 501 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 LYVE1Q9Y5Y7 322 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 SESN1Q9Y6P5 492 aa3.27□□□□□ -1.89
CDC42SE2-210ENST00000506929 KANSL1LA0AUZ9 987 aa3.26□□□□□ -1.89
CDC42SE2-210ENST00000506929 OR2M5A3KFT3 312 aa3.26□□□□□ -1.89
CDC42SE2-210ENST00000506929 AGAP14A8MT82 685 aa3.26□□□□□ -1.89
CDC42SE2-210ENST00000506929 F5H0A9 414 aaPredicted RBP3.26□□□□□ -1.89
CDC42SE2-210ENST00000506929 DVL1O14640 695 aa3.26□□□□□ -1.89
CDC42SE2-210ENST00000506929 MAP2K7O14733 419 aa3.26□□□□□ -1.89
CDC42SE2-210ENST00000506929 SCAMP1O15126 338 aa3.26□□□□□ -1.89
CDC42SE2-210ENST00000506929 VILLO15195 856 aa3.26□□□□□ -1.89
CDC42SE2-210ENST00000506929 LINC01565O15544 149 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms