RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
CDC42SE2-210ENST00000506929 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
CDC42SE2-210ENST00000506929 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE2-210ENST00000506929 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE2-210ENST00000506929 FOXD1Q16676 465 aa15.66■□□□□ 0.1
CDC42SE2-210ENST00000506929 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
CDC42SE2-210ENST00000506929 PPP6R1Q9UPN7 881 aa14.9□□□□□ -0.02
CDC42SE2-210ENST00000506929 ADRA2BP18089 450 aa14.88□□□□□ -0.03
CDC42SE2-210ENST00000506929 PIAS4Q8N2W9 510 aaPredicted RBP14.72□□□□□ -0.05
CDC42SE2-210ENST00000506929 MSH5O43196 834 aa14.55□□□□□ -0.08
CDC42SE2-210ENST00000506929 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
CDC42SE2-210ENST00000506929 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
CDC42SE2-210ENST00000506929 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
CDC42SE2-210ENST00000506929 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
CDC42SE2-210ENST00000506929 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
CDC42SE2-210ENST00000506929 KCNA4P22459 653 aa13.33□□□□□ -0.28
CDC42SE2-210ENST00000506929 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
CDC42SE2-210ENST00000506929 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
CDC42SE2-210ENST00000506929 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
CDC42SE2-210ENST00000506929 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
CDC42SE2-210ENST00000506929 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
CDC42SE2-210ENST00000506929 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
CDC42SE2-210ENST00000506929 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
CDC42SE2-210ENST00000506929 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
CDC42SE2-210ENST00000506929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDC42SE2-210ENST00000506929 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
CDC42SE2-210ENST00000506929 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
CDC42SE2-210ENST00000506929 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
CDC42SE2-210ENST00000506929 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
CDC42SE2-210ENST00000506929 ZBTB22O15209 634 aa12.33□□□□□ -0.44
CDC42SE2-210ENST00000506929 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
CDC42SE2-210ENST00000506929 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
CDC42SE2-210ENST00000506929 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
CDC42SE2-210ENST00000506929 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
CDC42SE2-210ENST00000506929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE2-210ENST00000506929 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
CDC42SE2-210ENST00000506929 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
CDC42SE2-210ENST00000506929 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
CDC42SE2-210ENST00000506929 APLP2Q06481 763 aa11.99□□□□□ -0.49
CDC42SE2-210ENST00000506929 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
CDC42SE2-210ENST00000506929 CAPN15O75808 1086 aa11.91□□□□□ -0.5
CDC42SE2-210ENST00000506929 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE2-210ENST00000506929 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE2-210ENST00000506929 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE2-210ENST00000506929 DSG3P32926 999 aa11.76□□□□□ -0.53
CDC42SE2-210ENST00000506929 ATXN8OSP0DMR3 200 aa11.73□□□□□ -0.53
CDC42SE2-210ENST00000506929 ABCB7O75027 752 aa11.64□□□□□ -0.55
CDC42SE2-210ENST00000506929 POLA2Q14181 598 aa11.57□□□□□ -0.56
CDC42SE2-210ENST00000506929 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE2-210ENST00000506929 FBLN2P98095 1184 aa11.28□□□□□ -0.6
CDC42SE2-210ENST00000506929 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE2-210ENST00000506929 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
CDC42SE2-210ENST00000506929 OSCARQ8IYS5 282 aa11.18□□□□□ -0.62
CDC42SE2-210ENST00000506929 POTEHQ6S545 545 aa11.11□□□□□ -0.63
CDC42SE2-210ENST00000506929 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
CDC42SE2-210ENST00000506929 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
CDC42SE2-210ENST00000506929 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
CDC42SE2-210ENST00000506929 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
CDC42SE2-210ENST00000506929 FKBP8Q14318 412 aa11□□□□□ -0.65
CDC42SE2-210ENST00000506929 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE2-210ENST00000506929 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
CDC42SE2-210ENST00000506929 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE2-210ENST00000506929 SPDYE4A6NLX3 237 aa10.92□□□□□ -0.66
CDC42SE2-210ENST00000506929 CHRDL2Q6WN34 429 aa10.84□□□□□ -0.67
CDC42SE2-210ENST00000506929 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDC42SE2-210ENST00000506929 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE2-210ENST00000506929 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
CDC42SE2-210ENST00000506929 PROM2Q8N271 834 aa10.74□□□□□ -0.69
CDC42SE2-210ENST00000506929 CLEC11AQ9Y240 323 aa10.73□□□□□ -0.69
CDC42SE2-210ENST00000506929 FXR2P51116 673 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDC42SE2-210ENST00000506929 STAG3Q9UJ98 1225 aa10.65□□□□□ -0.7
CDC42SE2-210ENST00000506929 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
CDC42SE2-210ENST00000506929 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
CDC42SE2-210ENST00000506929 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
CDC42SE2-210ENST00000506929 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
CDC42SE2-210ENST00000506929 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
CDC42SE2-210ENST00000506929 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
CDC42SE2-210ENST00000506929 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE2-210ENST00000506929 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE2-210ENST00000506929 HAX1O00165 279 aa10.37□□□□□ -0.75
CDC42SE2-210ENST00000506929 SP7Q8TDD2 431 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE2-210ENST00000506929 MIER1Q8N108 512 aa10.35□□□□□ -0.75
CDC42SE2-210ENST00000506929 IFNLR1Q8IU57 520 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE2-210ENST00000506929 PLEKHG5O94827 1062 aa10.33□□□□□ -0.76
CDC42SE2-210ENST00000506929 PLCD3Q8N3E9 789 aa10.31□□□□□ -0.76
CDC42SE2-210ENST00000506929 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
CDC42SE2-210ENST00000506929 NPM1P06748 294 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDC42SE2-210ENST00000506929 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-210ENST00000506929 EVX2Q03828 476 aa10.23□□□□□ -0.77
CDC42SE2-210ENST00000506929 CD44P16070 742 aaKnown RBP10.22□□□□□ -0.77
CDC42SE2-210ENST00000506929 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE2-210ENST00000506929 KLHL34Q8N239 644 aa10.21□□□□□ -0.77
CDC42SE2-210ENST00000506929 PAK3O75914 559 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE2-210ENST00000506929 NUBP1P53384 320 aa10.13□□□□□ -0.79
CDC42SE2-210ENST00000506929 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
CDC42SE2-210ENST00000506929 RASEFQ8IZ41 740 aa10.12□□□□□ -0.79
CDC42SE2-210ENST00000506929 SPOCK2Q92563 424 aa10.11□□□□□ -0.79
CDC42SE2-210ENST00000506929 ZNF579Q8NAF0 562 aaKnown RBP10.09□□□□□ -0.79
CDC42SE2-210ENST00000506929 RTN4Q9NQC3 1192 aaKnown RBP10.08□□□□□ -0.8
CDC42SE2-210ENST00000506929 CLCN6P51797 869 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms