RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ADCK2Q7Z695 626 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 CACTIN-AS1Q8N1I8 211 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 TOP6BLQ8N6T0 577 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 TMBIM1Q969X1 311 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 AKTIPQ9H8T0 292 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 C4AP0C0L4 1744 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 C4BP0C0L5 1744 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 FAM240BA0A1B0GVZ2 78 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 FUOMA2VDF0 154 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 NOTOA8MTQ0 251 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 H0YAE9 185 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 XYLBO75191 536 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 FABP3P05413 133 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 SLC1A2P43004 574 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 CD97P48960 835 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 NRG1Q02297 640 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 NPTX1Q15818 432 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNF280DQ6N043 979 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 ZZZ3Q8IYH5 903 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 SPATA22Q8NHS9 363 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 AURKBQ96GD4 344 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 EBF1Q9UH73 591 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 LRP6O75581 1613 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 H0Y858 1186 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 DNAJB5O75953 348 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 PSMA1P25786 263 aaKnown RBP17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 RPS7P62081 194 aaKnown RBP17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 TUBA1BP68363 451 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 RELAQ04206 551 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 TMPRSS11AQ6ZMR5 421 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 PTCHD4Q6ZW05 846 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 TUBA1AQ71U36 451 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 CYP2U1Q7Z449 544 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 ELMO1Q92556 727 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 FIZ1Q96SL8 496 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 MAF1Q9H063 256 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 USP29Q9HBJ7 922 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 THG1LQ9NWX6 298 aaKnown RBP17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 PSAT1Q9Y617 370 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNF541Q9H0D2 1346 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 A8MT66 165 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 CLDN5O00501 218 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 CXCR6O00574 342 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 CYP11A1P05108 521 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 HERVK_113P63132 956 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 PIGGQ5H8A4 983 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 ITIH5Q86UX2 942 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 DHRS4Q9BTZ2 278 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 ERVK-6Q9BXR3 956 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 VPS28Q9UK41 221 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 PMF1-BGLAPU3KQ54 211 aa17.08■□□□□ 0.32
HMGXB3-201ENST00000502717 RPP40O75818 363 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 CTSKP43235 329 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 SPIBQ01892 262 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 EIF2B5Q13144 721 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 ZSWIM7Q19AV6 140 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 TSTD2Q5T7W7 516 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 OR10A6Q8NH74 314 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 STON2Q8WXE9 905 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 CCM2LQ9NUG4 571 aaPredicted RBP17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 GDAP2Q9NXN4 497 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 MOCS1Q9NZB8 636 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 ZW10O43264 779 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 STX11O75558 287 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 PRKD3O94806 890 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 COLEC12Q5KU26 742 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 C9orf57Q5W0N0 161 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 PQLC3Q8N755 202 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 ANKFN1Q8N957 763 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 TSPAN18Q96SJ8 248 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 SPATA7Q9P0W8 599 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 ATP6V1HQ9UI12 483 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 HES2Q9Y543 173 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 MYH13Q9UKX3 1938 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 ILVBLA1L0T0 632 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 SLC7A4O43246 635 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 SCNN1AP37088 669 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 SRP54P61011 504 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 CNSTQ6PJW8 725 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 FCRL2Q96LA5 508 aaPredicted RBP17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 GAS2L1Q99501 681 aaPredicted RBP17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 DCSTAMPQ9H295 470 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 IFNGR2P38484 337 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 TRIM71Q2Q1W2 868 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 PRR23BQ6ZRT6 265 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 STYXQ8WUJ0 223 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 NSMCE3Q96MG7 304 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 COPS4Q9BT78 406 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNF222Q9UK12 451 aa17.07■□□□□ 0.32
HMGXB3-201ENST00000502717 ENDOD1O94919 500 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 NR2F6P10588 404 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 LPOP22079 712 aaPredicted RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 PAICSP22234 425 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 HTR7P34969 479 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ATP4BP51164 291 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 DNASE1L3Q13609 305 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 C5orf22Q49AR2 442 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 TRPM4Q8TD43 1214 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 MAGEB10Q96LZ2 347 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms