RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 UCKL1Q9NWZ5 548 aa8.04□□□□□ -1.12
TM4SF1-204ENST00000493348 SYBUQ9NX95 663 aa8.04□□□□□ -1.12
TM4SF1-204ENST00000493348 DLL3Q9NYJ7 618 aa8.04□□□□□ -1.12
TM4SF1-204ENST00000493348 SIRPGQ9P1W8 387 aa8.04□□□□□ -1.12
TM4SF1-204ENST00000493348 ATXN10Q9UBB4 475 aa8.04□□□□□ -1.12
TM4SF1-204ENST00000493348 KLF15Q9UIH9 416 aa8.04□□□□□ -1.12
TM4SF1-204ENST00000493348 VPS9D1Q9Y2B5 631 aa8.04□□□□□ -1.12
TM4SF1-204ENST00000493348 COL5A1P20908 1838 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ARID1BQ8NFD5 2236 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 TCRBV7S3A2A0A539 114 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CPED1A4D0V7 1026 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 MROH6A6NGR9 719 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 OR2AG2A6NM03 316 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 OR5K4A6NMS3 321 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 RHPN2P1A8MT19 583 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 PDZK1P1A8MUH7 402 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 H7C0S8 307 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CCL22O00626 93 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 YY2O15391 372 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 RAD51CO43502 376 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 SIGLEC6O43699 453 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 NDUFS3O75489 264 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 RFPL3O75679 317 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 TTC4O95801 387 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 GOT2P00505 430 aaKnown RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 OR56A5P0C7T3 313 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ATP1B2P14415 290 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNF7P17097 686 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNF8P17098 575 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 IDSP22304 550 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ACRV1P26436 265 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 PBLDP30039 288 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 HALP42357 657 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 NSG1P42857 185 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 PTGIRP43119 386 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 MAGEA6P43360 314 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 TTPAP49638 278 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ITGA8P53708 1063 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 EMP3P54852 163 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CRADDP78560 199 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CTBSQ01459 385 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 SHBQ15464 509 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 HIF1AQ16665 826 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 SYTL3Q4VX76 610 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 PYCR3Q53H96 274 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 FNBP1LQ5T0N5 605 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 C6orf132Q5T0Z8 1188 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 RNF187Q5TA31 235 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 RNASEH2BQ5TBB1 312 aaKnown RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ANKRD22Q5VYY1 191 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 DBX2Q6ZNG2 339 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CEP128Q6ZU80 1094 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CENPUQ71F23 418 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 DET1Q7L5Y6 550 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ADGRG6Q86SQ4 1221 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 PIP4P1Q86T03 277 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 AMZ2Q86W34 360 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 SERPINA9Q86WD7 417 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 SLC25A45Q8N413 288 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ARL10Q8N8L6 244 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 NAT8LQ8N9F0 302 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 GSDMBQ8TAX9 411 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ZDHHC1Q8WTX9 485 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNF669Q96BR6 464 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 STAMBPL1Q96FJ0 436 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 APOLD1Q96LR9 279 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ERP44Q9BS26 406 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 TIMM29Q9BSF4 260 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CLPBQ9H078 707 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CCDC68Q9H2F9 335 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 SYNDIG1Q9H7V2 258 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 PPANQ9NQ55 473 aaKnown RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 KLC4Q9NSK0 619 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 ZDHHC3Q9NYG2 299 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 TAAR2Q9P1P5 351 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 CNOT6Q9ULM6 557 aaKnown RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 SOX13Q9UN79 622 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 BTBD3Q9Y2F9 522 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 DNAJC16Q9Y2G8 782 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 SNX24Q9Y343 169 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 PRKAB1Q9Y478 270 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 MRFAP1Q9Y605 127 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 DNMT3AQ9Y6K1 912 aaPredicted RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 OAS3Q9Y6K5 1087 aaKnown RBP8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 RPS6KL1Q9Y6S9 549 aa8.03□□□□□ -1.12
TM4SF1-204ENST00000493348 FAM237BA0A1B0GVD1 139 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 SPAARA0A1B0GVQ0 90 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 UBA6A0AVT1 1052 aaPredicted RBP8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 CCDC162PA2VCL2 907 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 CD3EAPO15446 510 aaKnown RBP8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 DNAJC6O75061 913 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 AVILO75366 819 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 TMEM63AO94886 807 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 AP2A2O94973 939 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 SEC31AO94979 1220 aaKnown RBP8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 VAPBO95292 243 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 FTH1P02794 183 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 GSTM1P09488 218 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 FTH1P19P0C7X4 201 aa8.02□□□□□ -1.13
TM4SF1-204ENST00000493348 PGAM1P18669 254 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms