RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 PAF1Q8N7H5 531 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 KYQ8NBH2 561 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 PCDH19Q8TAB3 1148 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 IFI44Q8TCB0 444 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 CXorf40AQ8TE69 158 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 SCG3Q8WXD2 468 aaKnown RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 TSACCQ96A04 125 aaPredicted RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 FUBP1Q96AE4 644 aaKnown RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 ISG20Q96AZ6 181 aaKnown RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 DGCR14Q96DF8 476 aaKnown RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 SGF29Q96ES7 293 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 SNF8Q96H20 258 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 BTBD6Q96KE9 485 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 NSMCE3Q96MG7 304 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 SMIM14Q96QK8 99 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 TTYH3Q9C0H2 523 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 CLPBQ9H078 707 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 ISCUQ9H1K1 167 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 DPH5Q9H2P9 285 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 PDFQ9HBH1 243 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 ETNK1Q9HBU6 452 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 PCDH12Q9NPG4 1184 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 LZTFL1Q9NQ48 299 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 TXLNGQ9NUQ3 528 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 ETNK2Q9NVF9 386 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 NLGN3Q9NZ94 848 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 AIPL1Q9NZN9 384 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 SAMD15Q9P1V8 674 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 UBA2Q9UBT2 640 aaPredicted RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 APOBEC3BQ9UH17 382 aaKnown RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 DMGDHQ9UI17 866 aaKnown RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 IPO11Q9UI26 975 aaKnown RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 CLCA2Q9UQC9 943 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 FAM32AQ9Y421 112 aaKnown RBP5.81□□□□□ -1.48
CNOT9-207ENST00000489687 PCDHGA1Q9Y5H4 931 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 RAI2Q9Y5P3 530 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 MAST4O15021 2626 aa5.81□□□□□ -1.48
CNOT9-207ENST00000489687 EIF3FO00303 357 aaPredicted RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 DDX3XO00571 662 aaKnown RBP eCLIP5.8□□□□□ -1.489e-18■■■□□ 16.3
CNOT9-207ENST00000489687 PJA2O43164 708 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 AQP9O43315 295 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 TSPAN6O43657 245 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ICMTO60725 284 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 PRAMEF11O60813 436 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 USP12O75317 370 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 LRCH4O75427 683 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 UNC5CO95185 931 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 MAP3K6O95382 1288 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ASMTLO95671 621 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 POP4O95707 220 aaKnown RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 MT-CO3P00414 261 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 CSF2P04141 144 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 NUDT17P0C025 328 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ALPPL2P10696 532 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 CKMT1AP12532 417 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 KRT10P13645 584 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 TNFAIP3P21580 790 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 TGM2P21980 687 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 XPAP23025 273 aaPredicted RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ACP1P24666 158 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 IL1R2P27930 398 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 MIPP30301 263 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 CYLC1P35663 651 aaPredicted RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 MMP12P39900 470 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 RABIFP47224 123 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 PTDSS1P48651 473 aaKnown RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 RASSF2P50749 326 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 THOP1P52888 689 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 PDX1P52945 283 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 CSE1LP55060 971 aaKnown RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ADKP55263 362 aaKnown RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 POLE2P56282 527 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 PFN3P60673 137 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 HNRNPKP61978 463 aaKnown RBP eCLIP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 GABREP78334 506 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 NSUN2Q08J23 767 aaKnown RBP eCLIP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ZBTB17Q13105 803 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 DCTN2Q13561 401 aaKnown RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 RCN1Q15293 331 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ALG11Q2TAA5 492 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 WSCD2Q2TBF2 565 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 PARP15Q460N3 678 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 TDRD12Q587J7 1177 aaKnown RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 C3orf38Q5JPI3 329 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 CCDC122Q5T0U0 273 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 TMEM53Q6P2H8 277 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 C16orf46Q6P387 395 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 RFX8Q6ZV50 586 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ADGRG6Q86SQ4 1221 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 TTC7BQ86TV6 843 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 HID1Q8IV36 788 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ZBED8Q8IZ13 594 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 UMODL1-AS1Q8N2C9 162 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 MEIOBQ8N635 442 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 DCBLD1Q8N8Z6 715 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 TP53I13Q8NBR0 393 aaPredicted RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 PLA2G15Q8NCC3 412 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 FNDC8Q8TC99 324 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 MAPK15Q8TD08 544 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms