RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 FMO4P31512 558 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 GP5P40197 560 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 NSG1P42857 185 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 GNPDA1P46926 289 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 B4GALNT1Q00973 533 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 TMEM115Q12893 351 aaPredicted RBP12.17□□□□□ -0.46
TRAIP-209ENST00000488860 TCEA2Q15560 299 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 CCDC6Q16204 474 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 PTRHD1Q6GMV3 140 aaKnown RBP12.17□□□□□ -0.46
TRAIP-209ENST00000488860 PACS1Q6VY07 963 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 KIAA0408Q6ZU52 694 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 RD3Q7Z3Z2 195 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 LRRC6Q86X45 466 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 SYT12Q8IV01 421 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 GPATCH11Q8N954 259 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 RASGEF1AQ8N9B8 481 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 OR56A4Q8NGH8 313 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 OR2W6PQ8NHA6 318 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 C1orf216Q8TAB5 229 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 FAM174AQ8TBP5 190 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 HEXDCQ8WVB3 486 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 HNRNPLLQ8WVV9 542 aaKnown RBP12.17□□□□□ -0.46
TRAIP-209ENST00000488860 LPGAT1Q92604 370 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 SKA1Q96BD8 255 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 ZBTB9Q96C00 473 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 PDXPQ96GD0 296 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 TCF12Q99081 682 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 NDNQ99608 321 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 CPNE1Q99829 537 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 CCDC77Q9BR77 488 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 FUT8Q9BYC5 575 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 TRIM39Q9HCM9 518 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 FGF22Q9HCT0 170 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 FAM8A1Q9UBU6 413 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 GNPTGQ9UJJ9 305 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 PLAAQ9Y263 795 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 PRKAB1Q9Y478 270 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 PRSS21Q9Y6M0 314 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 PCDH15Q96QU1 1955 aa12.17□□□□□ -0.46
TRAIP-209ENST00000488860 IGLV3-16A0A075B6K0 115 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 TLR4O00206 839 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 PRMT5O14744 637 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 VILLO15195 856 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 AHSGP02765 367 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 HOXC4P09017 264 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 SAT1P21673 171 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 MPLP40238 635 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 DPP6P42658 865 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 MSH2P43246 934 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 SLCO1A2P46721 670 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 LEPRP48357 1165 aaKnown RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 CTSCP53634 463 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 CSE1LP55060 971 aaKnown RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 ZNF542PQ5EBM4 170 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 CTSL3PQ5NE16 218 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 KCTD16Q68DU8 428 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 CYS1Q717R9 158 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 IQCHQ86VS3 1027 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 PARGQ86W56 976 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 GALNT13Q8IUC8 556 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 HID1Q8IV36 788 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 CLDN19Q8N6F1 224 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 BEND7Q8N7W2 519 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 EPS8L3Q8TE67 593 aaKnown RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 SCG3Q8WXD2 468 aaKnown RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 OR1E3Q8WZA6 343 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 TSACCQ96A04 125 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 FAM136AQ96C01 138 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 SGF29Q96ES7 293 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 ELMO2Q96JJ3 720 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 RBBP8Q99708 897 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 ARRDC1-AS1Q9H2J1 176 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 CARS2Q9HA77 564 aaKnown RBP12.16□□□□□ -0.46
TRAIP-209ENST00000488860 CYP4F12Q9HCS2 524 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 FSCN3Q9NQT6 498 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 VPS18Q9P253 973 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 ZNHIT2Q9UHR6 403 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 SUFUQ9UMX1 484 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 GPSM3Q9Y4H4 160 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 PCDHB1Q9Y5F3 818 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 VPS13AQ96RL7 3174 aa12.16□□□□□ -0.46
TRAIP-209ENST00000488860 SPTY2D1-AS1A0A0U1RR47 76 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 IQCF5A8MTL0 148 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 PATE3B3GLJ2 98 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 E5RI56 91 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 GRID2O43424 1007 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 NUAK1O60285 661 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 NIPSNAP2O75323 286 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 RASGRP1O95267 797 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 TRIM16O95361 564 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 CEACAM5P06731 702 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 NUDT17P0C025 328 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 OR56A5P0C7T3 313 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 GABRB3P28472 473 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 NXPH1P58417 271 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 SRP54P61011 504 aaKnown RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 PPARDQ03181 441 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 OVGP1Q12889 678 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 BMPR2Q13873 1038 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 FZD2Q14332 565 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms