RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 ASH2LQ9UBL3 628 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 IPO11Q9UI26 975 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 ANAPC7Q9UJX3 599 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 CNOT6Q9ULM6 557 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 MYO6Q9UM54 1294 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 KMT2BQ9UMN6 2715 aaPredicted RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 GOLGA4Q13439 2230 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 USP24Q9UPU5 2620 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 LRP4O75096 1905 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 LY6G6EA0A0G2JKS1 128 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 TCRBV16S1A1N1A0A5B0 115 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 ARHGAP42A6NI28 874 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 DBX1A6NMT0 343 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 FPGTO14772 594 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 AP1G1O43747 822 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 GCATO75600 419 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 TM7SF2O76062 418 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 AMY2AP04746 511 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 SERPING1P05155 500 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 GZMAP12544 262 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 C6P13671 934 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 JUPP14923 745 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 AMY2BP19961 511 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 XPAP23025 273 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 SCNN1BP51168 640 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 AIF1P55008 147 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 GEMIN4P57678 1058 aaKnown RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 YBEYP58557 167 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 TAS2R40P59535 323 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 TPM4P67936 248 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 ZBED6P86452 979 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 SLC25A11Q02978 314 aaKnown RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 TARDBPQ13148 414 aaKnown RBP eCLIP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 SGCGQ13326 291 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 DPYSQ14117 519 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 SMAD1Q15797 465 aaKnown RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 CDKN3Q16667 212 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 CR1LQ2VPA4 569 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 INAVAQ3KP66 663 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 PARP15Q460N3 678 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 INO80DQ53TQ3 878 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 FIGNQ5HY92 759 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 AFMIDQ63HM1 303 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 NEK5Q6P3R8 708 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 KYAT3Q6YP21 454 aaKnown RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 B4GALNT4Q76KP1 1039 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 RD3Q7Z3Z2 195 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 POLNQ7Z5Q5 900 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 SRLQ86TD4 932 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 IQCHQ86VS3 1027 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 PROSER1Q86XN7 944 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 SFTPA2Q8IWL1 248 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 ZC3H7AQ8IWR0 971 aaKnown RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 CISD2Q8N5K1 135 aaKnown RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 PAF1Q8N7H5 531 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 TP53I13Q8NBR0 393 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 ZNF548Q8NEK5 533 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 PDCD6IPQ8WUM4 868 aaKnown RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 TSACCQ96A04 125 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 CENPTQ96BT3 561 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 APOLD1Q96LR9 279 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 ERVMER34-1Q9H9K5 563 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 PCDH18Q9HCL0 1135 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 MRPL40Q9NQ50 206 aaKnown RBP5.93□□□□□ -1.46
CDHR3-213ENST00000488386 CAPN11Q9UMQ6 739 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 OR1A2Q9Y585 309 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 PCDHB1Q9Y5F3 818 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 SCINQ9Y6U3 715 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 U3KQA8 63 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 CFAP47Q6ZTR5 3102 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 ADAMTS20P59510 1910 aa5.93□□□□□ -1.46
CDHR3-213ENST00000488386 IGF2RP11717 2491 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 COL27A1Q8IZC6 1860 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 SPTY2D1-AS1A0A0U1RR47 76 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CCDC66A2RUB6 948 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CPED1A4D0V7 1026 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 PMS2P1A4D2B8 440 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 ZSCAN5CA6NGD5 496 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 K7ESM1 405 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 YKT6O15498 198 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 TSPAN6O43657 245 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 TLX3O43711 291 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 MFSD11O43934 449 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 DFNA5O60443 496 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 MAGEC1O60732 1142 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 PEX11BO96011 259 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CYP1A2P05177 515 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 MYBL1P10243 752 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 TNNT1P13805 278 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CKMT2P17540 419 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 DESP17661 470 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CTPS1P17812 591 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 GM2AP17900 193 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 IL4RP24394 825 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 NUDT1P36639 197 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 NDST2P52849 883 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 ADKP55263 362 aaKnown RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CDH6P55285 790 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 PFN3P60673 137 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms