RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 LRRTM4Q86VH4 590 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 PLXDC1Q8IUK5 500 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 CNGA4Q8IV77 575 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 CNTD1Q8N815 330 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 TTC25Q96NG3 672 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 CHP1Q99653 195 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 CPNE7Q9UBL6 633 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 CNOT6Q9ULM6 557 aaKnown RBP13.08□□□□□ -0.32
UBA3-210ENST00000485424 SHANK1Q9Y566 2161 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 RAD1O60671 282 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 MFAP3LO75121 409 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 PMPCBO75439 489 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 NDST3O95803 873 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 EML2O95834 649 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 NR2C2P49116 596 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 POLE2P56282 527 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 SLC14A2Q15849 920 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 SEPT7Q16181 437 aaKnown RBP13.07□□□□□ -0.32
UBA3-210ENST00000485424 TEX44Q53QW1 395 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 ZNF648Q5T619 568 aaPredicted RBP13.07□□□□□ -0.32
UBA3-210ENST00000485424 LRRC38Q5VT99 294 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 TMC3Q7Z5M5 1100 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 CCDC50Q8IVM0 306 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 NLGN4XQ8N0W4 816 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 BMPERQ8N8U9 685 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 GPR26Q8NDV2 337 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 NLGN4YQ8NFZ3 816 aaPredicted RBP13.07□□□□□ -0.32
UBA3-210ENST00000485424 TFB1MQ8WVM0 346 aaKnown RBP13.07□□□□□ -0.32
UBA3-210ENST00000485424 GLYATL1Q969I3 302 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 ZPBPQ9BS86 351 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 EFHD1Q9BUP0 239 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 TSPY26PQ9H489 355 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 GLOD4Q9HC38 313 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 PRDM8Q9NQV8 689 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 INTUQ9ULD6 942 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 DNAJC16Q9Y2G8 782 aa13.07□□□□□ -0.32
UBA3-210ENST00000485424 PCYT1BQ9Y5K3 369 aaPredicted RBP13.07□□□□□ -0.32
UBA3-210ENST00000485424 C3orf70A6NLC5 250 aaPredicted RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 ZNF891A8MT65 544 aaPredicted RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 CAPN5O15484 640 aaPredicted RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 MTSS1O43312 755 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 VEGFDO43915 354 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 CDK14O94921 469 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 MT-CYBP00156 380 aaPredicted RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 ZNF7P17097 686 aaPredicted RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 COMTP21964 271 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 CLCNKAP51800 687 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 MC2RQ01718 297 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 FOXM1Q08050 763 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 KCNAB2Q13303 367 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 COLEC12Q5KU26 742 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 B4GALNT4Q76KP1 1039 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 ADGRG6Q86SQ4 1221 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 TRAPPC5Q8IUR0 188 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 VSTM4Q8IW00 320 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 SPATA22Q8NHS9 363 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 P3H4Q92791 437 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 CXorf40BQ96DE9 158 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 CTRCQ99895 268 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 TBC1D10AQ9BXI6 508 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 ZCCHC2Q9C0B9 1178 aaKnown RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 TRIT1Q9H3H1 467 aaKnown RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 GPN2Q9H9Y4 310 aaPredicted RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 UBP1Q9NZI7 540 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 KLHL8Q9P2G9 620 aaPredicted RBP13.06□□□□□ -0.32
UBA3-210ENST00000485424 FAM153AQ9UHL3 310 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBA3-210ENST00000485424 HYOU1Q9Y4L1 999 aa13.06□□□□□ -0.32
UBA3-210ENST00000485424 FER1L5A0AVI2 2057 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 LILRA5A6NI73 299 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
UBA3-210ENST00000485424 POLR1CO15160 346 aaPredicted RBP13.05□□□□□ -0.32
UBA3-210ENST00000485424 PSTPIP1O43586 416 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 CST8O60676 142 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 MTX2O75431 263 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 SNRNP200O75643 2136 aaKnown RBP13.05□□□□□ -0.32
UBA3-210ENST00000485424 RASSF9O75901 435 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 IDSP22304 550 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 PTPN3P26045 913 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 MAP4P27816 1152 aaKnown RBP13.05□□□□□ -0.32
UBA3-210ENST00000485424 HALP42357 657 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 SRSF1Q07955 248 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBA3-210ENST00000485424 ZDHHC20Q5W0Z9 365 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 MFSD7Q6UXD7 560 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 PID1Q7Z2X4 250 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 ARHGAP22Q7Z5H3 698 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 ZC3H18Q86VM9 953 aaKnown RBP13.05□□□□□ -0.32
UBA3-210ENST00000485424 PTRH1Q86Y79 214 aaKnown RBP13.05□□□□□ -0.32
UBA3-210ENST00000485424 RNF214Q8ND24 703 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 BRSK1Q8TDC3 778 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 RTP4Q96DX8 246 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 CATSPER2Q96P56 530 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 PLEKHG4BQ96PX9 1271 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 TRIB3Q96RU7 358 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 FERMT1Q9BQL6 677 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 TIMM29Q9BSF4 260 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 FSD1LQ9BXM9 530 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 EPN3Q9H201 632 aa13.05□□□□□ -0.32
UBA3-210ENST00000485424 BPIFA1Q9NP55 256 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms