RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CYP4F2P78329 520 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 HMGCS1Q01581 520 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CYP4F3Q08477 520 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CYBRD1Q53TN4 286 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 GLT6D1Q7Z4J2 308 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 IGFN1Q86VF2 1251 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 SYTL1Q8IYJ3 562 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 OR52B6Q8NGF0 335 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 LINGO1Q96FE5 620 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 SEPT5Q99719 369 aaPredicted RBP12.6□□□□□ -0.39
VPS52-218ENST00000482399 RUBCNLQ9H714 662 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 RMI1Q9H9A7 625 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 KLQ9UEF7 1012 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 PCDHB3Q9Y5E6 796 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 QSER1Q2KHR3 1735 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 A0A1W2PP18 115 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 PTGESO14684 152 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CLPXO76031 633 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 S1PR4O95977 384 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ANXA6P08133 673 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ODC1P11926 461 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 MOGQ16653 247 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 AP5B1Q2VPB7 878 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 RANBP10Q6VN20 620 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 KIAA0408Q6ZU52 694 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 GPRIN3Q6ZVF9 776 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ARHGAP12Q8IWW6 846 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 SLC7A5P1Q8MH63 180 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 FEM1CQ96JP0 617 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 SLC25A51Q9H1U9 297 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 SYTL2Q9HCH5 934 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ARMC1Q9NVT9 282 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 PABPN1LA6NDY0 278 aaKnown RBP12.6□□□□□ -0.39
VPS52-218ENST00000482399 CLDN25C9JDP6 229 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CBX4O00257 560 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 IRAK2O43187 625 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 VPS26AO75436 327 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 G6PDP11413 515 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 GRK4P32298 578 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ACVRL1P37023 503 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 MAGEA8P43361 318 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CDKN1CP49918 316 aaPredicted RBP12.6□□□□□ -0.39
VPS52-218ENST00000482399 DAG1Q14118 895 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 PTGR1Q14914 329 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 PTPRRQ15256 657 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 C18orf21Q32NC0 220 aaPredicted RBP12.6□□□□□ -0.39
VPS52-218ENST00000482399 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
VPS52-218ENST00000482399 DET1Q7L5Y6 550 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 CCDC103Q8IW40 242 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 LZTR1Q8N653 840 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ATG16L2Q8NAA4 619 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 NODALQ96S42 347 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 FUNDC2Q9BWH2 189 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 VTA1Q9NP79 307 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 TMLHEQ9NVH6 421 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 MIOSQ9NXC5 875 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 ST3GAL5Q9UNP4 418 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 HS3ST4Q9Y661 456 aa12.6□□□□□ -0.39
VPS52-218ENST00000482399 PDHXO00330 501 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 STX7O15400 261 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 SEC22BO75396 215 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 PRKD3O94806 890 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 SEC24AO95486 1093 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 SERPINF2P08697 491 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 DBTP11182 482 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 GDF5P43026 501 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 MAP2K4P45985 399 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 GPR15P49685 360 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ACADVLP49748 655 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 PLA2G16P53816 162 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 DDX39BQ13838 428 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 TRIP4Q15650 581 aaPredicted RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 MAPKAPK3Q16644 382 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 SYT16Q17RD7 645 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 PYCR3Q53H96 274 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 TTC23Q5W5X9 447 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 IQSEC1Q6DN90 963 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 GALNT10Q86SR1 603 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 TLK2Q86UE8 772 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 OR56A4Q8NGH8 313 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 KCTD13Q8WZ19 329 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ADAMTS10Q9H324 1103 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 TUBB1Q9H4B7 451 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ACTR8Q9H981 624 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 DFNA5O60443 496 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 CD1DP15813 335 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 CD97P48960 835 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ARHGDIAP52565 204 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 SLC13A2Q13183 592 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 KCNAB2Q13303 367 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 SELPLGQ14242 412 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 SPCS2Q15005 226 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ATP6AP1Q15904 470 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 FAM174BQ3ZCQ3 159 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 PDCD4Q53EL6 469 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 INTS11Q5TA45 600 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms