RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 CXorf40BQ96DE9 158 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 ZDHHC12Q96GR4 267 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 ELMO2Q96JJ3 720 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 TIMM29Q9BSF4 260 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 XPO4Q9C0E2 1151 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 LRRC4CQ9HCJ2 640 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 POT1Q9NUX5 634 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 OGFRQ9NZT2 677 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 DNAJC16Q9Y2G8 782 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 RELNP78509 3460 aa13.66□□□□□ -0.22
SEMA3F-208ENST00000470737 PIPSLA2A3N6 862 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 CLEC18AA5D8T8 446 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 JCHAINP01591 159 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 ZNF7P17097 686 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 IDSP22304 550 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 HNRNPH3P31942 346 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 SLC19A1P41440 591 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 CAPZBP47756 277 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 ARSEP51690 589 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 MLLT10P55197 1068 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 DCDC1P59894 354 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 SH3BP2P78314 561 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 DNASE1L3Q13609 305 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 IRGCQ6NXR0 463 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 CLEC18BQ6UXF7 455 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 PRSS42Q7Z5A4 293 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 ADGRG6Q86SQ4 1221 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 PPP1R3BQ86XI6 285 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 CLEC18CQ8NCF0 446 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 LRRN4Q8WUT4 740 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 SEC14L1Q92503 715 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 GPR63Q9BZJ6 419 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 PDE7BQ9NP56 450 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 SCHIP1Q9P0W5 487 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 PADI1Q9ULC6 663 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 SHOC2Q9UQ13 582 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 SLC30A1Q9Y6M5 507 aa13.65□□□□□ -0.22
SEMA3F-208ENST00000470737 BLACEA4D250 179 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 KCNK1O00180 336 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 CHUKO15111 745 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 VEGFDO43915 354 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 VPS4BO75351 444 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 SPAG6O75602 509 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 CREG1O75629 220 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 CDK14O94921 469 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 GYPCP04921 128 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 SERPING1P05155 500 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 KRT7P08729 469 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 FGF5P12034 268 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 RPL10P27635 214 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 HALP42357 657 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 LEPRP48357 1165 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 CD97P48960 835 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 PMS2P54278 862 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 GBE1Q04446 702 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 GTF2H3Q13889 308 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 ATP13A4Q4VNC1 1196 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 CCDC70Q6NSX1 233 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 SIDT2Q8NBJ9 832 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 GPR26Q8NDV2 337 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 RSC1A1Q92681 617 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 ZNF624Q9P2J8 865 aaPredicted RBP13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 NFKBIL1Q9UBC1 381 aaPredicted RBP13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 VPS4AQ9UN37 437 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 PCDHGA6Q9Y5G7 932 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 RP1L1Q8IWN7 2480 aaPredicted RBP13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 SPTBN1Q01082 2364 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-208ENST00000470737 C21orf140B9A014 251 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 RECKO95980 971 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 MMP2P08253 660 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 FURINP09958 794 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 ARL4DP49703 201 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 AP1B1Q10567 949 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 C4orf17Q53FE4 359 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 HGSNATQ68CP4 663 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 ALKBH5Q6P6C2 394 aaKnown RBP13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 KLHL35Q6PF15 583 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 ABRAXAS1Q6UWZ7 409 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 FAM92BQ6ZTR7 304 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 NT5DC3Q86UY8 548 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 TRAPPC5Q8IUR0 188 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 GDAP1Q8TB36 358 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 TTC25Q96NG3 672 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 ANP32EQ9BTT0 268 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 MAGEE1Q9HCI5 957 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 LHX9Q9NQ69 397 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 DTLQ9NZJ0 730 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 EPHA6Q9UF33 1036 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 SLC23A2Q9UGH3 650 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 LCMT1Q9UIC8 334 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 TLK1Q9UKI8 766 aa13.63□□□□□ -0.23
SEMA3F-208ENST00000470737 RARRES3Q9UL19 164 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms