RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PATE3B3GLJ2 98 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 H3BM21 787 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 ARHGAP33O14559 1287 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 PRMT5O14744 637 aaPredicted RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 CHUKO15111 745 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 RIPK2O43353 540 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 ERLIN1O75477 346 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 AP2A2O94973 939 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 ZNF806P0C7X5 589 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 ZNF8P17098 575 aaPredicted RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 POLD2P49005 469 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 ARRB1P49407 418 aaPredicted RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 HK3P52790 923 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 ADARP55265 1226 aaKnown RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 B4GALNT1Q00973 533 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 ILF2Q12905 390 aaKnown RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 EIF2B5Q13144 721 aaKnown RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 CTBP1Q13363 440 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 NAB1Q13506 487 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 ZNF648Q5T619 568 aaPredicted RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 MARK2Q7KZI7 788 aaKnown RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 GALNT13Q8IUC8 556 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 DENND6AQ8IWF6 608 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 RASGEF1AQ8N9B8 481 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 OR1E3Q8WZA6 343 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 LPGAT1Q92604 370 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 PDXPQ96GD0 296 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 BOCQ9BWV1 1114 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 CLPBQ9H078 707 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 CARS2Q9HA77 564 aaKnown RBP15.02■□□□□ -0
SNIP1-202ENST00000468040 CYP4F12Q9HCS2 524 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 DNAJC28Q9NX36 388 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 TXNDC16Q9P2K2 825 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 MOSPD1Q9UJG1 213 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 SUFUQ9UMX1 484 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 GPR34Q9UPC5 381 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 PCDHB1Q9Y5F3 818 aa15.02■□□□□ -0
SNIP1-202ENST00000468040 GON4LQ3T8J9 2241 aa15.02□□□□□ -0.01
SNIP1-202ENST00000468040 SDK1Q7Z5N4 2213 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 UBA6A0AVT1 1052 aaPredicted RBP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 CCDC151A5D8V7 595 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 YKT6O15498 198 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 GRID2O43424 1007 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 FOXD2O60548 495 aaPredicted RBP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 DNAJC6O75061 913 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 CER1O95813 267 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 S1PR4O95977 384 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 TNFP01375 233 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 ESR1P03372 595 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 CSF2P04141 144 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 NME1P15531 152 aaKnown RBP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 RPS3P23396 243 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 GNPDA1P46926 289 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 LEPRP48357 1165 aaKnown RBP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 IRX4P78413 519 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 BNC1Q01954 994 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 NHLH1Q02575 133 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 BRD3Q15059 726 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 CCDC6Q16204 474 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 KBTBD12Q3ZCT8 623 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 BCL7AQ4VC05 210 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 DET1Q7L5Y6 550 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 LRRTM4Q86VH4 590 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 TRAPPC5Q8IUR0 188 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 HID1Q8IV36 788 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 CTAGE3PQ8IX95 158 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 PHACTR4Q8IZ21 702 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 UBLCP1Q8WVY7 318 aaPredicted RBP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 TSACCQ96A04 125 aaPredicted RBP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 OR2M4Q96R27 311 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 CYTH2Q99418 400 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 ELF4Q99607 663 aaPredicted RBP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 TSSK1BQ9BXA7 367 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 SLC13A1Q9BZW2 595 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 ACSS3Q9H6R3 686 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 MRPL40Q9NQ50 206 aaKnown RBP15.01□□□□□ -0.01
SNIP1-202ENST00000468040 ZNHIT2Q9UHR6 403 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 RABGEF1Q9UJ41 708 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 GNPTGQ9UJJ9 305 aa15.01□□□□□ -0.01
SNIP1-202ENST00000468040 MUC6Q6W4X9 2439 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 KLHL33A6NCF5 533 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 OR2AG2A6NM03 316 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 H3BMM5 538 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 KMOO15229 486 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 OR1I1O60431 355 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 C1QAP02745 245 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 GSTM1P09488 218 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 OR56A5P0C7T3 313 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 JUNDP17535 347 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 ENGP17813 658 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 RXRGP48443 463 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 PRLHRP49683 370 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 ATXN3P54252 364 aaPredicted RBP15□□□□□ -0.01
SNIP1-202ENST00000468040 EIF3BP55884 814 aaKnown RBP15□□□□□ -0.01
SNIP1-202ENST00000468040 HNRNPKP61978 463 aaKnown RBP eCLIP15□□□□□ -0.01
SNIP1-202ENST00000468040 MPP1Q00013 466 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 GSTM4Q03013 218 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 LRP8Q14114 963 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 CSRP2Q16527 193 aa15□□□□□ -0.01
SNIP1-202ENST00000468040 ZNF423Q2M1K9 1284 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms