RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 SAP25Q8TEE9 199 aa12.98□□□□□ -0.33
PHGDH-203ENST00000462324 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.98□□□□□ -0.33
PHGDH-203ENST00000462324 FMO2Q99518 471 aa12.98□□□□□ -0.33
PHGDH-203ENST00000462324 FAM167BQ9BTA0 163 aa12.98□□□□□ -0.33
PHGDH-203ENST00000462324 GSDMCQ9BYG8 508 aa12.98□□□□□ -0.33
PHGDH-203ENST00000462324 ARFGAP3Q9NP61 516 aa12.98□□□□□ -0.33
PHGDH-203ENST00000462324 MRPL40Q9NQ50 206 aaKnown RBP12.98□□□□□ -0.33
PHGDH-203ENST00000462324 KLF15Q9UIH9 416 aa12.98□□□□□ -0.33
PHGDH-203ENST00000462324 DOLKQ9UPQ8 538 aa12.98□□□□□ -0.33
PHGDH-203ENST00000462324 CHMP2BQ9UQN3 213 aa12.98□□□□□ -0.33
PHGDH-203ENST00000462324 PLXNA2O75051 1894 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 SPAG17Q6Q759 2223 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 IGLV3-16A0A075B6K0 115 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-203ENST00000462324 C4orf47A7E2U8 309 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 TPP1O14773 563 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 SCAMP1O15126 338 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 FLRT2O43155 660 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 GPR39O43194 453 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 MTX2O75431 263 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 BANF1O75531 89 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 SPAG6O75602 509 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 FUCA1P04066 466 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 ANXA6P08133 673 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 GSTM1P09488 218 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 ARNTP27540 789 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 MAGEA4P43358 317 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 GSTM4Q03013 218 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 BNIP3Q12983 259 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 DBN1Q16643 649 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 UAP1L1Q3KQV9 507 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 ZNF648Q5T619 568 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-203ENST00000462324 STEAP4Q687X5 459 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 TMEM220Q6QAJ8 160 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 PACS1Q6VY07 963 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 UNC5AQ6ZN44 842 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 CYS1Q717R9 158 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 KCNMB4Q86W47 210 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 LRRC6Q86X45 466 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 RELL1Q8IUW5 271 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 ANKMY2Q8IV38 441 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 RASGEF1AQ8N9B8 481 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 LRRN4CLQ8ND94 238 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 ZNF548Q8NEK5 533 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-203ENST00000462324 OR2I1PQ8NGU4 316 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 GSDMBQ8TAX9 411 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 GPBAR1Q8TDU6 330 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 LMX1AQ8TE12 382 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 UBXN4Q92575 508 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 CFAP36Q96G28 342 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 PDXPQ96GD0 296 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 DUSP23Q9BVJ7 150 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 TMEM168Q9H0V1 697 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 VPS37BQ9H9H4 285 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 RXFP3Q9NSD7 469 aa12.97□□□□□ -0.33
PHGDH-203ENST00000462324 PNMA8BQ9ULN7 279 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-203ENST00000462324 LMO7DNF2Z398 122 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 GDF9O60383 454 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 SDC3O75056 442 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 OR56A5P0C7T3 313 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 CA5AP35218 305 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 GRK6P43250 576 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 CARSP49589 748 aaKnown RBP12.96□□□□□ -0.33
PHGDH-203ENST00000462324 CLCNKAP51800 687 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 ILF2Q12905 390 aaKnown RBP12.96□□□□□ -0.33
PHGDH-203ENST00000462324 SLMAPQ14BN4 828 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 BCL7AQ4VC05 210 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 KHDC1Q4VXA5 237 aaKnown RBP12.96□□□□□ -0.33
PHGDH-203ENST00000462324 ZNF449Q6P9G9 518 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 CHST15Q7LFX5 561 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-203ENST00000462324 TAF8Q7Z7C8 310 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 TRAPPC5Q8IUR0 188 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 SGF29Q96ES7 293 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 CERS2Q96G23 380 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.33
PHGDH-203ENST00000462324 TIMM29Q9BSF4 260 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 LRRC61Q9BV99 259 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 TSSK1BQ9BXA7 367 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 CLPBQ9H078 707 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 TCEAL2Q9H3H9 227 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-203ENST00000462324 PPANQ9NQ55 473 aaKnown RBP12.96□□□□□ -0.33
PHGDH-203ENST00000462324 INTS10Q9NVR2 710 aaKnown RBP12.96□□□□□ -0.33
PHGDH-203ENST00000462324 NLGN3Q9NZ94 848 aa12.96□□□□□ -0.33
PHGDH-203ENST00000462324 LRRK1Q38SD2 2015 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 VPS13AQ96RL7 3174 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 C17orf113A0A1B0GUU1 675 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 H3BMM5 538 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 PRMT5O14744 637 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-203ENST00000462324 YY2O15391 372 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 POP7O75817 140 aaKnown RBP12.95□□□□□ -0.34
PHGDH-203ENST00000462324 PRSS56P0CW18 603 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 MCM3P25205 808 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 ADARP55265 1226 aaKnown RBP12.95□□□□□ -0.34
PHGDH-203ENST00000462324 B4GALNT1Q00973 533 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 IL9RQ01113 521 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 CTBSQ01459 385 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 MGAT5Q09328 741 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 C1orf61Q13536 156 aa12.95□□□□□ -0.34
PHGDH-203ENST00000462324 FASTKD3Q14CZ7 662 aaKnown RBP12.95□□□□□ -0.34
PHGDH-203ENST00000462324 INSCQ1MX18 579 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms