RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ANKUB1A6NFN9 424 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 LRRC53A6NM62 1247 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 GRID2O43424 1007 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 NRDCO43847 1150 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 CEACAM4O75871 244 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 CBX6O95503 412 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 NELFEP18615 380 aaKnown RBP16.95■□□□□ 0.3
TOP3A-202ENST00000461127 LPOP22079 712 aaPredicted RBP16.95■□□□□ 0.3
TOP3A-202ENST00000461127 SOX5P35711 763 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 PTGIRP43119 386 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 CAPZBP47756 277 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 ZNF135P52742 658 aaPredicted RBP16.95■□□□□ 0.3
TOP3A-202ENST00000461127 EPHB1P54762 984 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 TUBB3Q13509 450 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 IL10RAQ13651 578 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 PPP6R3Q5H9R7 873 aaPredicted RBP16.95■□□□□ 0.3
TOP3A-202ENST00000461127 FAM199XQ6PEV8 388 aaPredicted RBP16.95■□□□□ 0.3
TOP3A-202ENST00000461127 RAVER1Q8IY67 606 aaKnown RBP16.95■□□□□ 0.3
TOP3A-202ENST00000461127 SIDT2Q8NBJ9 832 aaKnown RBP16.95■□□□□ 0.3
TOP3A-202ENST00000461127 PIH1D2Q8WWB5 315 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 RUFY1Q96T51 708 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 PCDHB18PQ96TA0 734 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 CARD9Q9H257 536 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 ABHD10Q9NUJ1 306 aa16.95■□□□□ 0.3
TOP3A-202ENST00000461127 SEPT11Q9NVA2 429 aaKnown RBP16.95■□□□□ 0.3
TOP3A-202ENST00000461127 DIDO1Q9BTC0 2240 aaKnown RBP16.94■□□□□ 0.3
TOP3A-202ENST00000461127 KRT86O43790 486 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 KIF1CO43896 1103 aaKnown RBP16.94■□□□□ 0.3
TOP3A-202ENST00000461127 CLCNKAP51800 687 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 STC1P52823 247 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 MAXP61244 160 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 ASIC2Q16515 512 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 CA9Q16790 459 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 PWWP2BQ6NUJ5 590 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 IRGCQ6NXR0 463 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 FAM92BQ6ZTR7 304 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 MON1BQ7L1V2 547 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 PGBD5Q8N414 524 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 RBMXL3Q8N7X1 1067 aaKnown RBP16.94■□□□□ 0.3
TOP3A-202ENST00000461127 TC2NQ8N9U0 490 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 FDCSPQ8NFU4 85 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 SNRNP40Q96DI7 357 aaKnown RBP16.94■□□□□ 0.3
TOP3A-202ENST00000461127 C19orf60Q96EN9 201 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 PANX2Q96RD6 677 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 KCTD15Q96SI1 283 aaPredicted RBP16.94■□□□□ 0.3
TOP3A-202ENST00000461127 RUBCNLQ9H714 662 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 KLC4Q9NSK0 619 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 GPR83Q9NYM4 423 aa16.94■□□□□ 0.3
TOP3A-202ENST00000461127 A0A0J9YYE9 177 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 NUAK1O60285 661 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 MTA2O94776 668 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 TIAF1O95411 115 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 TRBC1P01850 177 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 CCDC172P0C7W6 258 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 MMP13P45452 471 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 JAM2P57087 298 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 ACY1Q03154 408 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 MARC1Q5VT66 337 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 RBM12BQ8IXT5 1001 aaKnown RBP16.93■□□□□ 0.3
TOP3A-202ENST00000461127 UBXN4Q92575 508 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 SYN2Q92777 582 aaPredicted RBP16.93■□□□□ 0.3
TOP3A-202ENST00000461127 MR1Q95460 341 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 DNAJC7Q99615 494 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 SNRNP25Q9BV90 132 aaKnown RBP16.93■□□□□ 0.3
TOP3A-202ENST00000461127 AKIRIN1Q9H9L7 192 aaPredicted RBP16.93■□□□□ 0.3
TOP3A-202ENST00000461127 ASF1BQ9NVP2 202 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 EPHA6Q9UF33 1036 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 ENTPD4Q9Y227 616 aa16.93■□□□□ 0.3
TOP3A-202ENST00000461127 APCP25054 2843 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 TCRBV5S1A1TA0A578 114 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 ARHGAP10A1A4S6 786 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 A6NL46 340 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 PDZK1P1A8MUH7 402 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 ZNF185O15231 689 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 CPNE3O75131 537 aaKnown RBP16.92■□□□□ 0.3
TOP3A-202ENST00000461127 TMEM63AO94886 807 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 PDHA1P08559 390 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 FERP16591 822 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 PSMA2P25787 234 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 SLC19A1P41440 591 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 HCAR3P49019 387 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 ARL4DP49703 201 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 RRADP55042 308 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 ITGA1P56199 1179 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 PER3P56645 1201 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 ATPAF2Q8N5M1 289 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 TMEM102Q8N9M5 508 aaPredicted RBP16.92■□□□□ 0.3
TOP3A-202ENST00000461127 RSC1A1Q92681 617 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 TRIM44Q96DX7 344 aaPredicted RBP16.92■□□□□ 0.3
TOP3A-202ENST00000461127 NUDT9Q9BW91 350 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 ZWILCHQ9H900 591 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 WASH6PQ9NQA3 447 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 POT1Q9NUX5 634 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 PCSK1NQ9UHG2 260 aa16.92■□□□□ 0.3
TOP3A-202ENST00000461127 CNOT6Q9ULM6 557 aaKnown RBP16.92■□□□□ 0.3
TOP3A-202ENST00000461127 POLEQ07864 2286 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 PRPSAP2O60256 369 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 PEX11BO96011 259 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 KLK3P07288 261 aaPredicted RBP16.91■□□□□ 0.3
TOP3A-202ENST00000461127 GRNP28799 593 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms