RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 FBXO39Q8N4B4 442 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 TRIM58Q8NG06 486 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 RTP4Q96DX8 246 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 TMEM121Q9BTD3 319 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 TRIM4Q9C037 500 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 SYNDIG1Q9H7V2 258 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 BPIFA1Q9NP55 256 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.18■□□□□ 0.5
COL9A2-205ENST00000461118 LRIT1Q9P2V4 623 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 ATXN10Q9UBB4 475 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 IL17BQ9UHF5 180 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 ZNHIT2Q9UHR6 403 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 PPP2R2CQ9Y2T4 447 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 PLEKHM1Q9Y4G2 1056 aa18.18■□□□□ 0.5
COL9A2-205ENST00000461118 PCYT1BQ9Y5K3 369 aaPredicted RBP18.18■□□□□ 0.5
COL9A2-205ENST00000461118 CHUKO15111 745 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 RPLP0P05388 317 aaKnown RBP18.17■□□□□ 0.5
COL9A2-205ENST00000461118 ACTR1BP42025 376 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 ACTR1AP61163 376 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 NFKB2Q00653 900 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 KCTD11Q693B1 232 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 DENND5AQ6IQ26 1287 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 ARHGEF18Q6ZSZ5 1173 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 ADGRG6Q86SQ4 1221 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 PHYKPLQ8IUZ5 450 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 NAGSQ8N159 534 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 EXTL1Q92935 676 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 SGF29Q96ES7 293 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 GFM1Q96RP9 751 aaKnown RBP18.17■□□□□ 0.5
COL9A2-205ENST00000461118 C19orf43Q9BQ61 176 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 FEZ2Q9UHY8 353 aaPredicted RBP18.17■□□□□ 0.5
COL9A2-205ENST00000461118 TMPRSS11EQ9UL52 423 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 RNF215Q9Y6U7 377 aa18.17■□□□□ 0.5
COL9A2-205ENST00000461118 NVLO15381 856 aaKnown RBP18.16■□□□□ 0.5
COL9A2-205ENST00000461118 GRID2O43424 1007 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 LIASO43766 372 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 VEGFDO43915 354 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 METTL18O95568 372 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 ECEL1O95672 775 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 ITGB2P05107 769 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 ZNF8P17098 575 aaPredicted RBP18.16■□□□□ 0.5
COL9A2-205ENST00000461118 WT1P19544 449 aaPredicted RBP18.16■□□□□ 0.5
COL9A2-205ENST00000461118 SPAM1P38567 509 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 INHBCP55103 352 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 GDF10P55107 478 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 ZFP36L1Q07352 338 aaKnown RBP18.16■□□□□ 0.5
COL9A2-205ENST00000461118 NR1D2Q14995 579 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 TAF1AQ15573 450 aaPredicted RBP18.16■□□□□ 0.5
COL9A2-205ENST00000461118 OASLQ15646 514 aaKnown RBP18.16■□□□□ 0.5
COL9A2-205ENST00000461118 ATP13A5Q4VNC0 1218 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 CHST15Q7LFX5 561 aaPredicted RBP18.16■□□□□ 0.5
COL9A2-205ENST00000461118 ZNF438Q7Z4V0 828 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 BRSK1Q8TDC3 778 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 LRRC45Q96CN5 670 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 TBL1YQ9BQ87 522 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 TLR10Q9BXR5 811 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 OR2AG1Q9H205 316 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 LRRN3Q9H3W5 708 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 PKP3Q9Y446 797 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 PRKAB1Q9Y478 270 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 DOPEY2Q9Y3R5 2298 aa18.16■□□□□ 0.5
COL9A2-205ENST00000461118 C2orf81A6NN90 581 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 STX7O15400 261 aaKnown RBP18.15■□□□□ 0.5
COL9A2-205ENST00000461118 PSMD3O43242 534 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 LIPCP11150 499 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 ITIH1P19827 911 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 LPOP22079 712 aaPredicted RBP18.15■□□□□ 0.5
COL9A2-205ENST00000461118 ETV5P41161 510 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 CLCNKAP51800 687 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 SRSF1Q07955 248 aaKnown RBP eCLIP18.15■□□□□ 0.53e-7■□□□□ 9.1
COL9A2-205ENST00000461118 OLIG2Q13516 323 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 P3H1Q32P28 736 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 XKR5Q6UX68 686 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 USP53Q70EK8 1073 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 TMPRSS9Q7Z410 1059 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 SPRED1Q7Z699 444 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 ATG4AQ8WYN0 398 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 APOL2Q9BQE5 337 aa18.15■□□□□ 0.5
COL9A2-205ENST00000461118 GLYATL1P3A0A0U1RQE8 302 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 TMX2-CTNND1H3BSU7 103 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 GAPDHSO14556 408 aaPredicted RBP18.14■□□□□ 0.49
COL9A2-205ENST00000461118 SUV39H1O43463 412 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 BUD23O43709 281 aaKnown RBP18.14■□□□□ 0.49
COL9A2-205ENST00000461118 FAM87AP0C7U9 286 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 GPR3P46089 330 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 MAZP56270 477 aaKnown RBP18.14■□□□□ 0.49
COL9A2-205ENST00000461118 B4GALNT1Q00973 533 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 PDE1BQ01064 536 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 ZNF648Q5T619 568 aaPredicted RBP18.14■□□□□ 0.49
COL9A2-205ENST00000461118 DTX1Q86Y01 620 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 JAMLQ86YT9 394 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 CCNJLQ8IV13 435 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 SFRP1Q8N474 314 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 PATE1Q8WXA2 126 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 FAM117AQ9C073 453 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 LRRC40Q9H9A6 602 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 ARFGAP3Q9NP61 516 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 PISDQ9UG56 409 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 LOXL2Q9Y4K0 774 aa18.14■□□□□ 0.49
COL9A2-205ENST00000461118 PCDHGA4Q9Y5G9 962 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms