RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 ABATP80404 500 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 CREMQ03060 361 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 PUDPQ08623 228 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 IL18R1Q13478 541 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 NR6A1Q15406 480 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 CDC73Q6P1J9 531 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ITIH5Q86UX2 942 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 SLC22A16Q86VW1 577 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 FBXO39Q8N4B4 442 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 FNDC5Q8NAU1 212 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 CPT1BQ92523 772 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 MRPL39Q9NYK5 338 aaKnown RBP6.15□□□□□ -1.42
VPS13D-202ENST00000460333 CNOT6Q9ULM6 557 aaKnown RBP6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ERGIC3Q9Y282 383 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 INVSQ9Y283 1065 aa6.15□□□□□ -1.42
VPS13D-202ENST00000460333 ARPC4-TTLL3A0A0A6YYG9 625 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 TSPAN4O14817 238 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 AIREO43918 545 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 BANF1O75531 89 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 BCAS2O75934 225 aaPredicted RBP6.15□□□□□ -1.43
VPS13D-202ENST00000460333 SDC2P34741 201 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 CLCN5P51795 746 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 SLC18A2Q05940 514 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 PLD1Q13393 1074 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 TGFBIQ15582 683 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 PKDCCQ504Y2 493 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 TXNRD3NBQ6F5E7 133 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 FAM131AQ6UXB0 335 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 ZYG11AQ6WRX3 759 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 RASSF6Q6ZTQ3 369 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 PCDH19Q8TAB3 1148 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 SLC47A1Q96FL8 570 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 CORO1BQ9BR76 489 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 CAB39LQ9H9S4 337 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 SAGE1Q9NXZ1 904 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 FBXW11Q9UKB1 542 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 FNDC3AQ9Y2H6 1198 aaKnown RBP6.15□□□□□ -1.43
VPS13D-202ENST00000460333 GRIP1Q9Y3R0 1128 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 H3BNH8 94 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 ANGPTL1O95841 491 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 RPLP0P05388 317 aaKnown RBP6.15□□□□□ -1.43
VPS13D-202ENST00000460333 PCSK2P16519 638 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 GLDCP23378 1020 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 HOXC8P31273 242 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 EPHB3P54753 998 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 GNA12Q03113 381 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 MGAT3Q09327 533 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 HNRNPDQ14103 355 aaKnown RBP6.15□□□□□ -1.43
VPS13D-202ENST00000460333 USP41Q3LFD5 358 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 ZCCHC8Q6NZY4 707 aaKnown RBP6.15□□□□□ -1.43
VPS13D-202ENST00000460333 UNC5AQ6ZN44 842 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 ARHGAP36Q6ZRI8 547 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 ZBTB46Q86UZ6 589 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 GATAD2AQ86YP4 633 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 SLC44A2Q8IWA5 706 aaPredicted RBP6.15□□□□□ -1.43
VPS13D-202ENST00000460333 CLYBLQ8N0X4 340 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 CSGALNACT1Q8TDX6 532 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 NPY6RQ99463 290 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 PDCD10Q9BUL8 212 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 CRTAC1Q9NQ79 661 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 AASDHPPTQ9NRN7 309 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 WWOXQ9NZC7 414 aa6.15□□□□□ -1.43
VPS13D-202ENST00000460333 UBE2QL1A1L167 161 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 K7EPI3 171 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 LRIG2O94898 1065 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PFKMP08237 780 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ERCC2P18074 760 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ECHS1P30084 290 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TGFBR2P37173 567 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 RAB10P61026 200 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FOXD4Q12950 439 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PHKG1Q16816 387 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PGS1Q32NB8 556 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TTLL9Q3SXZ7 439 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 VWA5B1Q5TIE3 1220 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PPP2R2DQ66LE6 453 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TYW3Q6IPR3 259 aaKnown RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CNSTQ6PJW8 725 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CAMKK1Q8N5S9 505 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ZFP28Q8NHY6 868 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FBXO30Q8TB52 745 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ADAM32Q8TC27 787 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 MCOLN3Q8TDD5 553 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 NARS2Q96I59 477 aaKnown RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SLC2A13Q96QE2 648 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TTPALQ9BTX7 342 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TXLNGYQ9BZA5 131 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CPNE5Q9HCH3 593 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TRPM5Q9NZQ8 1165 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ZNF236Q9UL36 1845 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FAM240BA0A1B0GVZ2 78 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 F8W810 466 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 M0QZQ0 153 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PITPNM1O00562 1244 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PRMT5O14744 637 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 RGS14O43566 566 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SSNA1O43805 119 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 NPHS1O60500 1241 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ABCB7O75027 752 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms