RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SOX7Q9BT81 388 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 EFHD1Q9BUP0 239 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CCDC106Q9BWC9 280 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 BRIP1Q9BX63 1249 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FRMD8Q9BZ67 464 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 HAPLN2Q9GZV7 340 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 C14orf93Q9H972 538 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARMT1Q9H993 441 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 CERS4Q9HA82 394 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 NMUR1Q9HB89 426 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SH3GLB2Q9NR46 395 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RGS18Q9NS28 235 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 GKN1Q9NS71 199 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 IARS2Q9NSE4 1012 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PNPLA3Q9NST1 481 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 OLAHQ9NV23 265 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 KCMF1Q9P0J7 381 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MALT1Q9UDY8 824 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCYOX1Q9UHG3 505 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 TEKT2Q9UIF3 430 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 DAPK2Q9UIK4 370 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 VPS28Q9UK41 221 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCDHGB4Q9UN71 923 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SMG5Q9UPR3 1016 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 USP22Q9UPT9 525 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SORCS3Q9UPU3 1222 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 GPR52Q9Y2T5 361 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 KCNK7Q9Y2U2 307 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 MTO1Q9Y2Z2 717 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PLLPQ9Y342 182 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCDHGB5Q9Y5G0 923 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SRPRBQ9Y5M8 271 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SNX13Q9Y5W8 968 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RAD54BQ9Y620 910 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 UBE4BO95155 1302 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 XDHP47989 1333 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 IGSF1Q8N6C5 1336 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 BCORQ6W2J9 1755 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 KDM3BQ7LBC6 1761 aa3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 RBBP6Q7Z6E9 1792 aaKnown RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 PRG4Q92954 1404 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLIT1O75093 1534 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 A0A087WXM4 84 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 A0A0D9SFI3 127 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 A0A1W2PPW3 197 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARGFXA6NJG6 315 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 A8MU76 341 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 ERVV-1B6SEH8 477 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 PRRT4C9JH25 899 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 F8W036 122 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 J3QRK9 145 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 EEF2KO00418 725 aaKnown RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 KLF11O14901 512 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCDH17O14917 1159 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 ASNA1O43681 348 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 TYROBPO43914 113 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 NRP2O60462 931 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 BCAS1O75363 584 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 PALMO75781 387 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 CIB2O75838 187 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 RBBP9O75884 186 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 SEC14L2O76054 403 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR7A10O76100 309 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 KCNK2O95069 426 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 PTBP3O95758 552 aaKnown RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 NPPAP01160 153 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 CYP21A2P08686 494 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 KRT7P08729 469 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 HBQ1P09105 142 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 DLDP09622 509 aaKnown RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 POLR2MP0CAP2 368 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 DHRS4L1P0CG22 281 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 DBTP11182 482 aaKnown RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 ENO3P13929 434 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 HSD3B1P14060 373 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 POU2F1P14859 743 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 CREB1P16220 341 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 TSHRP16473 764 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF26P17031 533 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 AOC1P19801 751 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 RAB3AP20336 220 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 XPAP23025 273 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 F8A1P23610 371 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSMA2P25787 234 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 CD40LGP29965 261 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 HOXA7P31268 230 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 SOX6P35712 828 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARL4AP40617 200 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 EIF2DP41214 584 aaKnown RBP3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 PPP1R2P41236 205 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 MAGEA1P43355 309 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 ALDH1A3P47895 512 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 NPTX2P47972 431 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 MAPK12P53778 367 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 AIF1P55008 147 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 STX17P56962 302 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 NRG3P56975 720 aa3.6□□□□□ -1.83
HMGB3P8-201ENST00000449709 RAB14P61106 215 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms