RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 CCNHP51946 323 aaPredicted RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 ZNF484Q5JVG2 852 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 MMP10P09238 476 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 PFKPQ01813 784 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 ASTE1Q2TB18 679 aaPredicted RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 AARDQ4LEZ3 155 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 GCNT6Q5T4J0 391 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 ALYREFQ86V81 257 aaKnown RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 ABRAQ8N0Z2 381 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 TNFRSF25Q93038 417 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 TATDN2Q93075 761 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SLC38A4Q969I6 547 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 TCF25Q9BQ70 676 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 GDF3Q9NR23 364 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 GSKIPQ9P0R6 139 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 PCDHB5Q9Y5E4 795 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 AP1M2Q9Y6Q5 423 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 NME6O75414 186 aaPredicted RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 CYP11B2P19099 503 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SMARCD3Q6STE5 483 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 ZNF571Q7Z3V5 609 aaPredicted RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 GALNT12Q8IXK2 581 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 DQX1Q8TE96 717 aaKnown RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 KCTD7Q96MP8 289 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SAV1Q9H4B6 383 aaPredicted RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 MCCC2Q9HCC0 563 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 MUSKO15146 869 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SLC22A1O15245 554 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 DLSTP36957 453 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SEMA3AQ14563 771 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 VTCN1Q7Z7D3 282 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 TMED4Q7Z7H5 227 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SMARCD2Q92925 531 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 FBXO6Q9NRD1 293 aaPredicted RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 NR2E1Q9Y466 385 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 CAPN8A6NHC0 703 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 OAZ2O95190 189 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 LATS1O95835 1130 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 KLRC2P26717 231 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 CD86P42081 329 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SWT1Q5T5J6 900 aaKnown RBP16.34■□□□□ 0.21
RIF1-204ENST00000430328 SLC30A10Q6XR72 485 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 CACUL1Q86Y37 369 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SPPL2CQ8IUH8 684 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 GSTCDQ8NEC7 633 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 BRINP2Q9C0B6 783 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 OR10A4Q9H209 315 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 WASF3Q9UPY6 502 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 TGDSO95455 350 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 C22orf31O95567 290 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 DDX6P26196 483 aaKnown RBP eCLIP16.34■□□□□ 0.211e-8■■■□□ 17.3
RIF1-204ENST00000430328 SVOPLQ8N434 492 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 ZSCAN1Q8NBB4 408 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 TAPBPLQ9BX59 468 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 SLC5A7Q9GZV3 580 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 OR51V1Q9H2C8 321 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 ERVK-5Q9HDB9 667 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 IFNW1P05000 195 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 ACVR2AP27037 513 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 RAB39AQ14964 217 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 ARID1BQ8NFD5 2236 aaPredicted RBP16.33■□□□□ 0.21
RIF1-204ENST00000430328 MYH3P11055 1940 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 SSR2P43308 183 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 CCNYL2Q5T2Q4 361 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 FOXR1Q6PIV2 292 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 AENQ8WTP8 325 aaKnown RBP16.33■□□□□ 0.21
RIF1-204ENST00000430328 HEXDCQ8WVB3 486 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 BORCS8Q96FH0 119 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 HIPK3Q9H422 1215 aa16.33■□□□□ 0.21
RIF1-204ENST00000430328 CASTOR2A6NHX0 329 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 PSMB4P28070 264 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 SYNE4Q8N205 404 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 CADM2Q8N3J6 435 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 GALNT11Q8NCW6 608 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.2
RIF1-204ENST00000430328 TKTL2Q9H0I9 626 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 ELP3Q9H9T3 547 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 SETD4Q9NVD3 440 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 DNAAF2Q9NVR5 837 aaKnown RBP16.33■□□□□ 0.2
RIF1-204ENST00000430328 KLF15Q9UIH9 416 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 ERVK-11Q9UQG0 969 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 TSTD3H0UI37 97 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 CSTBP04080 98 aaKnown RBP16.33■□□□□ 0.2
RIF1-204ENST00000430328 FNTBP49356 437 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 DDR1Q08345 913 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 SMARCB1Q12824 385 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 C3orf33Q6P1S2 294 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 MYH15Q9Y2K3 1946 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 ATP6AP2A0A1C7CYW4 349 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 DPPA5A6NC42 116 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 ATP6AP2O75787 350 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 SLC35G4P0C7Q5 338 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 SCUBE3Q8IX30 993 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 HJURPQ8NCD3 748 aaPredicted RBP16.33■□□□□ 0.2
RIF1-204ENST00000430328 CLP1Q92989 425 aaKnown RBP16.33■□□□□ 0.2
RIF1-204ENST00000430328 MALSU1Q96EH3 234 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 ABCG8Q9H221 673 aa16.33■□□□□ 0.2
RIF1-204ENST00000430328 POLR1CO15160 346 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms