RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NELFEP18615 380 aaKnown RBP9.41□□□□□ -0.9
RFFL-203ENST00000413582 XRCC1P18887 633 aaPredicted RBP9.41□□□□□ -0.9
RFFL-203ENST00000413582 PTPN4P29074 926 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 HNRNPH3P31942 346 aaKnown RBP9.41□□□□□ -0.9
RFFL-203ENST00000413582 MMP13P45452 471 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 HCAR3P49019 387 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 CLCNKAP51800 687 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 ZNF135P52742 658 aaPredicted RBP9.41□□□□□ -0.9
RFFL-203ENST00000413582 IHHQ14623 411 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 CHRNA6Q15825 494 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 SLC6A19Q695T7 634 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 SYVN1Q86TM6 617 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 PSTKQ8IV42 348 aaKnown RBP9.41□□□□□ -0.9
RFFL-203ENST00000413582 LRRC8AQ8IWT6 810 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 MCOLN2Q8IZK6 566 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 BBS5Q8N3I7 341 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 ATPAF2Q8N5M1 289 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 OR8K1Q8NGG5 319 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 TRIM44Q96DX7 344 aaPredicted RBP9.41□□□□□ -0.9
RFFL-203ENST00000413582 ING2Q9H160 280 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 AKIRIN1Q9H9L7 192 aaPredicted RBP9.41□□□□□ -0.9
RFFL-203ENST00000413582 ACSS2Q9NR19 701 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 DNPEPQ9ULA0 475 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 SRPK3Q9UPE1 567 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 ZNF451Q9Y4E5 1061 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 PCDHGB7Q9Y5F8 929 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 CROCCQ5TZA2 2017 aa9.41□□□□□ -0.9
RFFL-203ENST00000413582 SVILO95425 2214 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 LRRC53A6NM62 1247 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 ATMINO43313 823 aaPredicted RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 GRID2O43424 1007 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 NUAK1O60285 661 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 DPM1O60762 260 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 MFAP3LO75121 409 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 LRCH4O75427 683 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 VIPP01282 170 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 CCDC172P0C7W6 258 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 AMD1P17707 334 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 FECHP22830 423 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 ELAVL4P26378 380 aaKnown RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 MIPP30301 263 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 SLC19A1P41440 591 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 PTGIRP43119 386 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 CCL11P51671 97 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 PPP1CAP62136 330 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 MAMLD1Q13495 774 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 TUBB3Q13509 450 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 CACHD1Q5VU97 1274 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 E4F1Q66K89 784 aaPredicted RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 PWWP2BQ6NUJ5 590 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 FAM199XQ6PEV8 388 aaPredicted RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 FAM92BQ6ZTR7 304 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 RAVER1Q8IY67 606 aaKnown RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 NDUFAF2Q8N183 169 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 RBMXL3Q8N7X1 1067 aaKnown RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 TC2NQ8N9U0 490 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 LYSMD1Q96S90 227 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 DNAJC7Q99615 494 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 AGPAT1Q99943 283 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 TDRD1Q9BXT4 1180 aaKnown RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 GPR87Q9BY21 358 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 TRIM7Q9C029 511 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 CARD9Q9H257 536 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 OSGEPL1Q9H4B0 414 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 ZWILCHQ9H900 591 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 KLC4Q9NSK0 619 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 POT1Q9NUX5 634 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 ZNHIT6Q9NWK9 470 aaKnown RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 TAS2R14Q9NYV8 317 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 AIPL1Q9NZN9 384 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 SEMA5BQ9P283 1151 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 ZNF624Q9P2J8 865 aaPredicted RBP9.4□□□□□ -0.9
RFFL-203ENST00000413582 ATXN10Q9UBB4 475 aa9.4□□□□□ -0.9
RFFL-203ENST00000413582 MDC1Q14676 2089 aaKnown RBP9.4□□□□□ -0.91
RFFL-203ENST00000413582 PIKFYVEQ9Y2I7 2098 aa9.4□□□□□ -0.91
RFFL-203ENST00000413582 PCSK5Q92824 1860 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 H3BRJ5 948 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 KRT86O43790 486 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 PRPSAP2O60256 369 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 KRT38O76015 456 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 CLDN7O95471 211 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 PRLP01236 227 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 BRAFP15056 766 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 FOLR1P15328 257 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 ZNF8P17098 575 aaPredicted RBP9.39□□□□□ -0.91
RFFL-203ENST00000413582 AMPD1P23109 780 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 VARSP26640 1264 aaKnown RBP9.39□□□□□ -0.91
RFFL-203ENST00000413582 SPINT3P49223 89 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 EPHB1P54762 984 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 CDH6P55285 790 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 GPR18Q14330 331 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 KCNAB1Q14722 419 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 NR6A1Q15406 480 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 DPYSL2Q16555 572 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 PLA2G4EQ3MJ16 856 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 ZNF648Q5T619 568 aaPredicted RBP9.39□□□□□ -0.91
RFFL-203ENST00000413582 MARC1Q5VT66 337 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 ALG1LQ6GMV1 187 aa9.39□□□□□ -0.91
RFFL-203ENST00000413582 PLEKHA7Q6IQ23 1121 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms