RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RASGEF1AQ8N9B8 481 aa28.99■■■□□ 2.23
USP42-202ENST00000404008 TTC25Q96NG3 672 aa28.99■■■□□ 2.23
USP42-202ENST00000404008 TMEM9BQ9NQ34 198 aa28.99■■■□□ 2.23
USP42-202ENST00000404008 PIAS2O75928 621 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 ZNF883P0CG24 379 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 RALBP11234 206 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 EPHA8P29322 1005 aaPredicted RBP28.98■■■□□ 2.23
USP42-202ENST00000404008 FRG1Q14331 258 aaKnown RBP28.98■■■□□ 2.23
USP42-202ENST00000404008 ITIH4Q14624 930 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 PYCR3Q53H96 274 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 LDB1Q86U70 411 aaPredicted RBP28.98■■■□□ 2.23
USP42-202ENST00000404008 KCNMB4Q86W47 210 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 GALNT13Q8IUC8 556 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 CERS2Q96G23 380 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 DCUN1D1Q96GG9 259 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 TTC1Q99614 292 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 LRRC61Q9BV99 259 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 BOCQ9BWV1 1114 aa28.98■■■□□ 2.23
USP42-202ENST00000404008 DMXL1Q9Y485 3027 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 FAM186AA6NE01 2351 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 GVINP1Q7Z2Y8 2422 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 SCAMP1O15126 338 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 SDC3O75056 442 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 TTPAP49638 278 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 BNIP3Q12983 259 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 THOC5Q13769 683 aaKnown RBP28.97■■■□□ 2.23
USP42-202ENST00000404008 GTF2H3Q13889 308 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 PACS1Q6VY07 963 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 PALM2Q8IXS6 379 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 OTUD6BQ8N6M0 293 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 EIF1ADQ8N9N8 165 aaKnown RBP28.97■■■□□ 2.23
USP42-202ENST00000404008 GSDMBQ8TAX9 411 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 C9orf72Q96LT7 481 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 TM7SF3Q9NS93 570 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 ZNHIT2Q9UHR6 403 aa28.97■■■□□ 2.23
USP42-202ENST00000404008 ZFC3H1O60293 1989 aaKnown RBP28.96■■■□□ 2.23
USP42-202ENST00000404008 CFAP99D6REC4 459 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 GRID2O43424 1007 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 GDF9O60383 454 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 TNFRSF8P28908 595 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 PPARGP37231 505 aaPredicted RBP28.96■■■□□ 2.23
USP42-202ENST00000404008 TYSND1Q2T9J0 566 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 HSP90AA5PQ58FG0 334 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 PRRT3Q5FWE3 981 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 TRMT10BQ6PF06 316 aaKnown RBP28.96■■■□□ 2.23
USP42-202ENST00000404008 KANSL1Q7Z3B3 1105 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 SDCCAG8Q86SQ7 713 aaPredicted RBP28.96■■■□□ 2.23
USP42-202ENST00000404008 CILP2Q8IUL8 1156 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 RELL1Q8IUW5 271 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 ZNF547Q8IVP9 402 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 ZNF548Q8NEK5 533 aaPredicted RBP28.96■■■□□ 2.23
USP42-202ENST00000404008 SAP25Q8TEE9 199 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 UBXN4Q92575 508 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 OR2M4Q96R27 311 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 TMEM168Q9H0V1 697 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 TRNAU1APQ9NX07 287 aaKnown RBP28.96■■■□□ 2.23
USP42-202ENST00000404008 SPASTQ9UBP0 616 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.96■■■□□ 2.23
USP42-202ENST00000404008 PRKAB1Q9Y478 270 aa28.96■■■□□ 2.23
USP42-202ENST00000404008 V9GYY5 206 aaPredicted RBP28.96■■■□□ 2.23
USP42-202ENST00000404008 ERVK-10P10266 1014 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 CTSEP14091 401 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 ATP1B2P14415 290 aaPredicted RBP28.95■■■□□ 2.22
USP42-202ENST00000404008 OGNP20774 298 aaKnown RBP28.95■■■□□ 2.22
USP42-202ENST00000404008 DGKAP23743 735 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 NSG1P42857 185 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 CTSCP53634 463 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 ZNF470Q6ECI4 717 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 DET1Q7L5Y6 550 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 LRRTM4Q86VH4 590 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 LMNTD2Q8IXW0 634 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 CALML6Q8TD86 181 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 FAM122AQ96E09 287 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 SGF29Q96ES7 293 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 FAM167BQ9BTA0 163 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 UCKL1Q9NWZ5 548 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 GPR34Q9UPC5 381 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 GPSM3Q9Y4H4 160 aa28.95■■■□□ 2.22
USP42-202ENST00000404008 PIKFYVEQ9Y2I7 2098 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 OR2AG2A6NM03 316 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 SGTAO43765 313 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 PCDHGA12O60330 932 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 OR1I1O60431 355 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 PMLP29590 882 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 SSTR1P30872 391 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 PLA2G5P39877 138 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 CRTC3Q6UUV7 619 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 CAPN12Q6ZSI9 719 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 TRAPPC5Q8IUR0 188 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 KIAA2013Q8IYS2 634 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 NAT14Q8WUY8 206 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 ZNF514Q96K75 400 aaPredicted RBP28.94■■■□□ 2.22
USP42-202ENST00000404008 TCF12Q99081 682 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 CLPBQ9H078 707 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 IARS2Q9NSE4 1012 aaKnown RBP28.94■■■□□ 2.22
USP42-202ENST00000404008 MOCS1Q9NZB8 636 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 PCDHGB2Q9Y5G2 931 aa28.94■■■□□ 2.22
USP42-202ENST00000404008 AQP9O43315 295 aa28.93■■■□□ 2.22
USP42-202ENST00000404008 GSTA2P09210 222 aa28.93■■■□□ 2.22
USP42-202ENST00000404008 GPX6P59796 221 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms