RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NPY2RP49146 381 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 CLK1P49759 484 aaKnown RBP13.74□□□□□ -0.21
SDC1-202ENST00000381150 ATP6V0D1P61421 351 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 GALNT2Q10471 571 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 COLEC12Q5KU26 742 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 TWIST2Q8WVJ9 160 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 FAR2Q96K12 515 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 ZBED2Q9BTP6 218 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 MROQ9BYG7 248 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 WDR12Q9GZL7 423 aaKnown RBP13.74□□□□□ -0.21
SDC1-202ENST00000381150 REXO4Q9GZR2 422 aaKnown RBP13.74□□□□□ -0.21
SDC1-202ENST00000381150 FBXW11Q9UKB1 542 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 RAD51BO15315 384 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 NDUFS2O75306 463 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 FADS2O95864 444 aaKnown RBP13.74□□□□□ -0.21
SDC1-202ENST00000381150 KCNC1P48547 511 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 FAM45BPQ6NSW5 357 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 UGT3A1Q6NUS8 523 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 AGMOQ6ZNB7 445 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 SCML4Q8N228 414 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 TMEM86AQ8N2M4 240 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 FAM45AQ8TCE6 357 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 DPF3Q92784 378 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 LPPQ93052 612 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 NODALQ96S42 347 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 TRIM39Q9HCM9 518 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 LIMD1Q9UGP4 676 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 BOLA1Q9Y3E2 137 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 MAGEB16A2A368 324 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 CCDC154A6NI56 674 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 GUCY1B2O75343 617 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 JRKO75564 520 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 BMP4P12644 408 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 GGT5P36269 586 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 LHX1P48742 406 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 HCAR3P49019 387 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 HK2P52789 917 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 AIF1P55008 147 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 OR4D2P58180 307 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 CHRNB3Q05901 458 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 PAGE3Q5JUK9 113 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 CALML6Q8TD86 181 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 OSCP1Q8WVF1 389 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 RPL3LQ92901 407 aaKnown RBP13.74□□□□□ -0.21
SDC1-202ENST00000381150 DHRS1Q96LJ7 313 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 UHRF1Q96T88 793 aaPredicted RBP13.74□□□□□ -0.21
SDC1-202ENST00000381150 HOPXQ9BPY8 73 aaPredicted RBP13.74□□□□□ -0.21
SDC1-202ENST00000381150 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 CNGB3Q9NQW8 809 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 DNAJC15Q9Y5T4 150 aa13.74□□□□□ -0.21
SDC1-202ENST00000381150 ARL5CA6NH57 179 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 NOTOA8MTQ0 251 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 MOCS2O96007 188 aaPredicted RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 THP07101 528 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 LTA4HP09960 611 aaKnown RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 DBTP11182 482 aaKnown RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 RPS3AP61247 264 aaKnown RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 SH3BP2P78314 561 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 TAF1CQ15572 869 aaPredicted RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 GPR162Q16538 588 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 DGUOKQ16854 277 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 FAM214AQ32MH5 1076 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 XAF1Q6GPH4 301 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 GDF6Q6KF10 455 aaPredicted RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 PKN3Q6P5Z2 889 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 PLEKHG7Q6ZR37 379 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 TBC1D21Q8IYX1 336 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 MAELQ96JY0 434 aaKnown RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 TEX37Q96LM6 180 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 ACOX2Q99424 681 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 THUMPD3Q9BV44 507 aaKnown RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 MEAF6Q9HAF1 191 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 CSNK1G1Q9HCP0 422 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 G3V2T6 193 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 UBXN8O00124 270 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 ENO2P09104 434 aaPredicted RBP13.73□□□□□ -0.21
SDC1-202ENST00000381150 SERPINB10P48595 397 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 ARPP19P56211 112 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 MAXP61244 160 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 BNIP2Q12982 314 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 SYT16Q17RD7 645 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 CD300LGQ6UXG3 332 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 LINC00523Q86TU6 105 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 GPR78Q96P69 363 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 DOK1Q99704 481 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 RASSF1Q9NS23 344 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.73□□□□□ -0.21
SDC1-202ENST00000381150 TRPV2Q9Y5S1 764 aa13.73□□□□□ -0.21
SDC1-202ENST00000381150 UBA6A0AVT1 1052 aaPredicted RBP13.72□□□□□ -0.21
SDC1-202ENST00000381150 SUPT3HB4E1H0 165 aa13.72□□□□□ -0.21
SDC1-202ENST00000381150 MSI1O43347 362 aaKnown RBP13.72□□□□□ -0.21
SDC1-202ENST00000381150 DUSP11O75319 330 aaKnown RBP13.72□□□□□ -0.21
SDC1-202ENST00000381150 CST1P01037 141 aa13.72□□□□□ -0.21
SDC1-202ENST00000381150 USP17L7P0C7H9 530 aa13.72□□□□□ -0.21
SDC1-202ENST00000381150 GPX3P22352 226 aa13.72□□□□□ -0.21
SDC1-202ENST00000381150 PIGAP37287 484 aa13.72□□□□□ -0.21
SDC1-202ENST00000381150 UFM1P61960 85 aa13.72□□□□□ -0.21
SDC1-202ENST00000381150 DAB2P98082 770 aa13.72□□□□□ -0.21
SDC1-202ENST00000381150 MGAT3Q09327 533 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms