RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 OR2T12Q8NG77 320 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 SMG9Q9H0W8 520 aaKnown RBP12.2□□□□□ -0.46
PTPRK-203ENST00000368207 R3HDMLQ9H3Y0 253 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 SLC27A6Q9Y2P4 619 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PSAT1Q9Y617 370 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 ITGB4P16144 1822 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 MYH7P12883 1935 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PER2O15055 1255 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 TIPRLO75663 272 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 CLDN9O95484 217 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 NUDT14O95848 222 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 TRBC1P01850 177 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 NELFEP18615 380 aaKnown RBP12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PROZP22891 400 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 CHIT1Q13231 466 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 GTF2H2Q13888 395 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PTPRCAPQ14761 206 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 RALGPS1Q5JS13 557 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 RBM20Q5T481 1227 aaKnown RBP12.2□□□□□ -0.46
PTPRK-203ENST00000368207 HLA-DQA1Q5Y7H0 255 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 GTF2H2CQ6P1K8 395 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 FAM156AQ8NDB6 213 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 ITCHQ96J02 903 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 HERPUD2Q9BSE4 406 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 ITM2AO43736 263 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 NBNO60934 754 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 CST1P01037 141 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 MT-ND1P03886 318 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 NR2F1P10589 423 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 NSG1P42857 185 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 POLR2JP52435 117 aaKnown RBP12.2□□□□□ -0.46
PTPRK-203ENST00000368207 TNK2Q07912 1038 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 SF1Q15637 639 aaKnown RBP12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PAOXQ6QHF9 649 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 Q6ZVU0 165 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 SETD9Q8NE22 299 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 CYB5D2Q8WUJ1 264 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PPCDCQ96CD2 204 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 DGCR6LQ9BY27 220 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 SUV39H2Q9H5I1 410 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 DDX18Q9NVP1 670 aaKnown RBP12.2□□□□□ -0.46
PTPRK-203ENST00000368207 CDH22Q9UJ99 828 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 U3KQV3 271 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 ATXN2Q99700 1313 aaKnown RBP12.2□□□□□ -0.46
PTPRK-203ENST00000368207 ECT2LQ008S8 904 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 GPM6BQ13491 265 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 DGCR6Q14129 220 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-203ENST00000368207 SPATA19Q7Z5L4 167 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 PIM3Q86V86 326 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 KBTBD7Q8WVZ9 684 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 ZNF599Q96NL3 588 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 PNPLA8Q9NP80 782 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 INSL5Q9Y5Q6 135 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 WNT6Q9Y6F9 365 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 BTAF1O14981 1849 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 ZW10O43264 779 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 KIF1CO43896 1103 aaKnown RBP12.19□□□□□ -0.46
PTPRK-203ENST00000368207 GJB5O95377 273 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 IFNA16P05015 189 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 RANBP1P43487 201 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 ZC3HC1Q86WB0 502 aaKnown RBP12.19□□□□□ -0.46
PTPRK-203ENST00000368207 CLDN19Q8N6F1 224 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 PRRG3Q9BZD7 231 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 ARMC7Q9H6L4 198 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 FLRT1Q9NZU1 646 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 RPS6KA6Q9UK32 745 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 MAPRE3Q9UPY8 281 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 A0A0D9SEW6 157 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 FGF18O76093 207 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 ATP6V1C1P21283 382 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 KIR3DL1P43629 444 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 SKP1P63208 163 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 NCF4Q15080 339 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 CPTPQ5TA50 214 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 MBLAC2Q68D91 279 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 CAND1Q86VP6 1230 aaKnown RBP12.19□□□□□ -0.46
PTPRK-203ENST00000368207 PARGQ86W56 976 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 GATAD2AQ86YP4 633 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 SPPL2CQ8IUH8 684 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 PQLC1Q8N2U9 271 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 LPGAT1Q92604 370 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 RORBQ92753 470 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 IGSF21Q96ID5 467 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 SH3GL3Q99963 347 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 TMEM245Q9H330 911 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 INTS10Q9NVR2 710 aaKnown RBP12.19□□□□□ -0.46
PTPRK-203ENST00000368207 TAS2R1Q9NYW7 299 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 TLL2Q9Y6L7 1015 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 INPPL1O15357 1258 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 APLP1P51693 650 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 PDK3Q15120 406 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 C2orf27AQ580R0 203 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 CARD16Q5EG05 197 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 MTX3Q5HYI7 312 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 PYCR2Q96C36 320 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 VMP1Q96GC9 406 aa12.19□□□□□ -0.46
PTPRK-203ENST00000368207 PTPN18Q99952 460 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms