RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 HLA-BQ31612 363 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 CD300EQ496F6 205 aaPredicted RBP5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 KRT39Q6A163 491 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 ATL3Q6DD88 541 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 CCNI2Q6ZMN8 369 aaPredicted RBP5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 CHST9Q7L1S5 443 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 RD3Q7Z3Z2 195 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 TMPRSS9Q7Z410 1059 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF575Q86XF7 245 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 FMNL3Q8IVF7 1028 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 HSCBQ8IWL3 235 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 ARHGAP18Q8N392 663 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 CPXM2Q8N436 756 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 SLC4A11Q8NBS3 891 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 CADM4Q8NFZ8 388 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 OR2T3Q8NH03 318 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 SNX21Q969T3 373 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 CCDC47Q96A33 483 aaKnown RBP5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 FBXL20Q96IG2 436 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 PDLIM2Q96JY6 352 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 NUP58Q9BVL2 599 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 DNAI2Q9GZS0 605 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 C6orf106Q9H6K1 298 aaPredicted RBP5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 TMEM8AQ9HCN3 771 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 CISHQ9NSE2 258 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 PTGFRNQ9P2B2 879 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 SLC17A6Q9P2U8 582 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 HPSEQ9Y251 543 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 BTBD3Q9Y2F9 522 aa5.35□□□□□ -1.55
RNU4-4P-201ENST00000364588 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 FAM149AA5PLN7 773 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 FAM47DPA6NHR8 397 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 YJEFN3A6XGL0 299 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 E7ENQ6 273 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 NPC1O15118 1278 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 MSI1O43347 362 aaKnown RBP5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 TIMM44O43615 452 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 TRIAP1O43715 76 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 SEMA4FO95754 770 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZBED1O96006 694 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 IGLV3-19P01714 112 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 MYL1P05976 194 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 EPB41P11171 864 aaKnown RBP5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 CD19P15391 556 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ITGALP20701 1170 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 HARS2P49590 506 aaKnown RBP5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF132P52740 706 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 BCAT1P54687 386 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 EPHB1P54762 984 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 SLC8A3P57103 927 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 NXPH1P58417 271 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 IL9RQ01113 521 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ADIGQ0VDE8 80 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 TUBB3Q13509 450 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 NFIL3Q16649 462 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 KIF19Q2TAC6 998 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 COL28A1Q2UY09 1125 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZCWPW2Q504Y3 356 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 MPPE1Q53F39 396 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 RAB41Q5JT25 222 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 KCNT1Q5JUK3 1230 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 BSPRYQ5W0U4 402 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ARHGAP17Q68EM7 881 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 KIAA0895LQ68EN5 471 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 PM20D1Q6GTS8 502 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 DPY19L2P1Q6NXN4 242 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 RFWD3Q6PCD5 774 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 IL27RAQ6UWB1 636 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 BHLHA9Q7RTU4 235 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 GLRX5Q86SX6 157 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 FAM217AQ8IXS0 508 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZC3H3Q8IXZ2 948 aaKnown RBP5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 GUF1Q8N442 669 aaKnown RBP5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ANKRD52Q8NB46 1076 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 FBXL13Q8NEE6 735 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 TOR1AIP2Q8NFQ8 470 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 UBA3Q8TBC4 463 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 POC1BQ8TC44 478 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 WFDC5Q8TCV5 224 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 RNF139Q8WU17 664 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 BIRC7Q96CA5 298 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 TMA16Q96EY4 203 aaKnown RBP5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ZNF764Q96H86 408 aaPredicted RBP5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 OSBPL9Q96SU4 736 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 C1orf43Q9BWL3 253 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 SLC2A11Q9BYW1 496 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 LHX5Q9H2C1 402 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 MRPL46Q9H2W6 279 aaKnown RBP5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 TMEM245Q9H330 911 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 LRRC4Q9HBW1 653 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 TM9SF3Q9HD45 589 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ABCB8Q9NUT2 735 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 PNPOQ9NVS9 261 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 RAB20Q9NX57 234 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 ETAA1Q9NY74 926 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 FOXJ2Q9P0K8 574 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 GGA2Q9UJY4 613 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 TSPAN16Q9UKR8 245 aa5.34□□□□□ -1.55
RNU4-4P-201ENST00000364588 PLA2G4CQ9UP65 541 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms