RNA–Protein interactions for RNA: ENST00000359079.8

SGMS2-201, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-201ENST00000359079 WDR6Q9NNW5 1121 aaKnown RBP4.4□□□□□ -1.71
SGMS2-201ENST00000359079 RAB9BQ9NP90 201 aa4.4□□□□□ -1.71
SGMS2-201ENST00000359079 FAM212BQ9NTI7 297 aaPredicted RBP4.4□□□□□ -1.71
SGMS2-201ENST00000359079 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.4□□□□□ -1.71
SGMS2-201ENST00000359079 AIPL1Q9NZN9 384 aa4.4□□□□□ -1.71
SGMS2-201ENST00000359079 HMG20BQ9P0W2 317 aa4.4□□□□□ -1.71
SGMS2-201ENST00000359079 SEMA5BQ9P283 1151 aa4.4□□□□□ -1.71
SGMS2-201ENST00000359079 TRMT6Q9UJA5 497 aaKnown RBP4.4□□□□□ -1.71
SGMS2-201ENST00000359079 PTBP2Q9UKA9 531 aaKnown RBP4.4□□□□□ -1.71
SGMS2-201ENST00000359079 SNX9Q9Y5X1 595 aa4.4□□□□□ -1.71
SGMS2-201ENST00000359079 ZCCHC6Q5VYS8 1495 aaKnown RBP4.4□□□□□ -1.71
SGMS2-201ENST00000359079 MAGEA13PA6NCF6 341 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 LACTBL1A8MY62 500 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 KIF2AO00139 706 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CTDSPLO15194 276 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 PLPP2O43688 288 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 NEMFO60524 1076 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 NCR1O76036 304 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 AK1P00568 194 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CYP1A2P05177 515 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CHRM2P08172 466 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 APEHP13798 732 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 EPHB2P29323 1055 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CCND3P30281 292 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CYP2C18P33260 490 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 GMPSP49915 693 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CYP2J2P51589 502 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 GBX2P52951 348 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 TPTEP56180 551 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 GALK2Q01415 458 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CFHR3Q02985 330 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 RUNX1T1Q06455 604 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 KCNMB1Q16558 191 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CCDC40Q4G0X9 1142 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ZNF618Q5T7W0 954 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 Q6ZRM9 215 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 RBM43Q6ZSC3 357 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 RUFY3Q7L099 469 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 TFAP2DQ7Z6R9 452 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 PIGWQ7Z7B1 504 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 IGFN1Q86VF2 1251 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ZNF410Q86VK4 478 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 TMEM173Q86WV6 379 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ZNF761Q86XN6 746 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 KRTAP1-3Q8IUG1 177 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 KDM8Q8N371 416 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 L3MBTL4Q8NA19 623 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 OR52K2Q8NGK3 314 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 WDR20Q8TBZ3 569 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 NEU4Q8WWR8 484 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 MSI2Q96DH6 328 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CDCA5Q96FF9 252 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 PANX3Q96QZ0 392 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 NUDCD1Q96RS6 583 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 LMF1Q96S06 567 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ZNF577Q9BSK1 485 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 EDEM2Q9BV94 578 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 MTMR12Q9C0I1 747 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 HIPK3Q9H422 1215 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ZNF768Q9H5H4 540 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 NSUN3Q9H649 340 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 SRD5A3Q9H8P0 318 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 TBC1D17Q9HA65 648 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 EQTNQ9NQ60 294 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 DDX18Q9NVP1 670 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CLIP2Q9UDT6 1046 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 PLEKHB1Q9UF11 243 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 IL17BQ9UHF5 180 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 UNC13AQ9UPW8 1703 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 C2orf92A0A1B0GVN3 265 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 TYW5A2RUC4 315 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CPED1A4D0V7 1026 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 SH3D21A4FU49 640 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ZNF503-AS2A6NEH8 195 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CFAP73A6NFT4 308 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 VCYO14598 125 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 FOXD2O60548 495 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 PEX10O60683 326 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 TSC22D2O75157 780 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 MTRF1O75570 445 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 OR6B1O95007 311 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ACSL3O95573 720 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 DDX5P17844 614 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ARF4P18085 180 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 GDI1P31150 447 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 TIA1P31483 386 aaKnown RBP eCLIP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 FRKP42685 505 aaPredicted RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 ATP5OP48047 213 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CENPAP49450 140 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CLCNKBP51801 687 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
SGMS2-201ENST00000359079 CETN1Q12798 172 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 USP41Q3LFD5 358 aa4.39□□□□□ -1.71
SGMS2-201ENST00000359079 TBC1D25Q3MII6 688 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms