RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 DGKEP52429 567 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 SEC24CP53992 1094 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 RPS21P63220 83 aaKnown RBP9.5□□□□□ -0.89
NPHP1-202ENST00000355301 IRX4P78413 519 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 MAP7D1Q3KQU3 841 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 TMEM259Q4ZIN3 620 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 KIAA1161Q6NSJ0 714 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 LRRC8EQ6NSJ5 796 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 KLC3Q6P597 504 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 PHYKPLQ8IUZ5 450 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 PELI3Q8N2H9 469 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 SPATA6LQ8N4H0 392 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 NKAPQ8N5F7 415 aaKnown RBP9.5□□□□□ -0.89
NPHP1-202ENST00000355301 CCDC63Q8NA47 563 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 OR14C36Q8NHC7 312 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 GIMAP7Q8NHV1 300 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 RDH11Q8TC12 318 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 LRRC8CQ8TDW0 803 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 GANCQ8TET4 914 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 ZNF75CPQ92670 426 aaPredicted RBP9.5□□□□□ -0.89
NPHP1-202ENST00000355301 FAM136AQ96C01 138 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 DCUN1D1Q96GG9 259 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 NELL2Q99435 816 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 SLC30A3Q99726 388 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 MRPL57Q9BQC6 102 aaKnown RBP9.5□□□□□ -0.89
NPHP1-202ENST00000355301 DERL2Q9GZP9 239 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 MRPL46Q9H2W6 279 aaKnown RBP9.5□□□□□ -0.89
NPHP1-202ENST00000355301 KDM4CQ9H3R0 1056 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 LMAN1LQ9HAT1 526 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 POLMQ9NP87 494 aaPredicted RBP9.5□□□□□ -0.89
NPHP1-202ENST00000355301 LATS2Q9NRM7 1088 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 XPR1Q9UBH6 696 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 MID2Q9UJV3 735 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 FBXL21Q9UKT6 434 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 CNOT6Q9ULM6 557 aaKnown RBP9.5□□□□□ -0.89
NPHP1-202ENST00000355301 NCKAP1Q9Y2A7 1128 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 MUC3AQ02505 3323 aa9.5□□□□□ -0.89
NPHP1-202ENST00000355301 TRPM6Q9BX84 2022 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 TCP11X1B4DZS4 312 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 G3V2L1 256 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 K7ESM1 405 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 TK2O00142 265 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 KLF11O14901 512 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 ATG13O75143 517 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 AP2A2O94973 939 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 SLC25A14O95258 325 aaPredicted RBP9.49□□□□□ -0.89
NPHP1-202ENST00000355301 TSPAN12O95859 305 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 RBP1P09455 135 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 OR56A5P0C7T3 313 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 CPA3P15088 417 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 CD1DP15813 335 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 MSH3P20585 1137 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 AKT1P31749 480 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 GPR1P46091 355 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 PCLAFQ15004 111 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 KHDC1Q4VXA5 237 aaKnown RBP9.49□□□□□ -0.89
NPHP1-202ENST00000355301 TECRLQ5HYJ1 363 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 SEL1L3Q68CR1 1132 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 RAET1GQ6H3X3 334 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 NEK5Q6P3R8 708 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 ISCA2Q86U28 154 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 NUDCD3Q8IVD9 361 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 SPNS2Q8IVW8 549 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 SIDT2Q8NBJ9 832 aaKnown RBP9.49□□□□□ -0.89
NPHP1-202ENST00000355301 RAB3IL1Q8TBN0 382 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 INPP5DQ92835 1189 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 PDLIM5Q96HC4 596 aaKnown RBP9.49□□□□□ -0.89
NPHP1-202ENST00000355301 PANX3Q96QZ0 392 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 MECRQ9BV79 373 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 C1QTNF2Q9BXJ5 285 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 MANSC1Q9H8J5 431 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 PREBQ9HCU5 417 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 SPATS2LQ9NUQ6 558 aaKnown RBP9.49□□□□□ -0.89
NPHP1-202ENST00000355301 CPSF2Q9P2I0 782 aaKnown RBP9.49□□□□□ -0.89
NPHP1-202ENST00000355301 KLHL42Q9P2K6 505 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 ZFR2Q9UPR6 939 aaKnown RBP9.49□□□□□ -0.89
NPHP1-202ENST00000355301 PIKFYVEQ9Y2I7 2098 aa9.49□□□□□ -0.89
NPHP1-202ENST00000355301 CCDC189A1A4V9 331 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 FAM170BA6NMN3 283 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 QSOX1O00391 747 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 SGTAO43765 313 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 MAGEC1O60732 1142 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 MTX2O75431 263 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 KCNA4P22459 653 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 ALDH3A1P30838 453 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 TPMTP51580 245 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 IL2P60568 153 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 ATP6V0D1P61421 351 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 TMEM115Q12893 351 aaPredicted RBP9.48□□□□□ -0.89
NPHP1-202ENST00000355301 GAS6Q14393 721 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 UBXN2BQ14CS0 331 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 PNCKQ6P2M8 343 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 KIAA1324Q6UXG2 1013 aaKnown RBP9.48□□□□□ -0.89
NPHP1-202ENST00000355301 ADAMTSL4Q6UY14 1074 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 TRIM42Q8IWZ5 723 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 SIX5Q8N196 739 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 RHEBL1Q8TAI7 183 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 LKAAEAR1Q8TD35 194 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 NAT14Q8WUY8 206 aa9.48□□□□□ -0.89
NPHP1-202ENST00000355301 SCYL1Q96KG9 808 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms