RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 NADKO95544 446 aaPredicted RBP10.75□□□□□ -0.69
SND1-201ENST00000354725 HNRNPCL4P0DMR1 293 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 PSMC3P17980 439 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 GRIA1P42261 906 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 CDKL1Q00532 357 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 SLC6A3Q01959 620 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 ORC1Q13415 861 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 TRIM60Q495X7 471 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 PMF1Q6P1K2 205 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 IKBIPQ70UQ0 350 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 BTLAQ7Z6A9 289 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 KLHDC8BQ8IXV7 354 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 C7orf31Q8N865 590 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 POC1BQ8TC44 478 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 PPP1R13LQ8WUF5 828 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 TFB1MQ8WVM0 346 aaKnown RBP10.75□□□□□ -0.69
SND1-201ENST00000354725 ACDQ96AP0 544 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 ZNF560Q96MR9 790 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 CYP4F11Q9HBI6 524 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 NXF1Q9UBU9 619 aaKnown RBP10.75□□□□□ -0.69
SND1-201ENST00000354725 CDH22Q9UJ99 828 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 TSPAN16Q9UKR8 245 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 EIF3LQ9Y262 564 aaKnown RBP10.75□□□□□ -0.69
SND1-201ENST00000354725 CHD7Q9P2D1 2997 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 NUDT19A8MXV4 375 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 PRPSAP2O60256 369 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 GLRA3O75311 464 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 USP12O75317 370 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 NDUFS6O75380 124 aaKnown RBP10.75□□□□□ -0.69
SND1-201ENST00000354725 APRTP07741 180 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 PRKAR1BP31321 381 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 ASMTP46597 345 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 HSPA13P48723 471 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 S100A12P80511 92 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 TARDBPQ13148 414 aaKnown RBP eCLIP10.75□□□□□ -0.697e-7■■■■□ 21.2
SND1-201ENST00000354725 ZNF248Q8NDW4 579 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 CCDC120Q96HB5 630 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 HS6ST2Q96MM7 605 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 TMEM246Q9BRR3 403 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 SLC13A1Q9BZW2 595 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 FAM96AQ9H5X1 160 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 TRMT13Q9NUP7 481 aaKnown RBP10.75□□□□□ -0.69
SND1-201ENST00000354725 SLC39A1Q9NY26 324 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 RCOR3Q9P2K3 495 aaPredicted RBP10.75□□□□□ -0.69
SND1-201ENST00000354725 SUCOQ9UBS9 1254 aaKnown RBP10.75□□□□□ -0.69
SND1-201ENST00000354725 RNF11Q9Y3C5 154 aa10.75□□□□□ -0.69
SND1-201ENST00000354725 KIAA0100Q14667 2235 aaKnown RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 SERTM1A2A2V5 107 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 ARHGAP42A6NI28 874 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 HACD1B0YJ81 288 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 PAPSS1O43252 624 aaPredicted RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 SERPINE1P05121 402 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 SELLP14151 372 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 CD19P15391 556 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 CCNA2P20248 432 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 IL10P22301 178 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 GLDCP23378 1020 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 HOXC12P31275 282 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 SLC1A6P48664 564 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 MAPKAPK2P49137 400 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 BCAR1P56945 870 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 TRAF2Q12933 501 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 ZNF846Q147U1 533 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 AADACL4Q5VUY2 407 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 EPGNQ6UW88 154 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 FKBP9P1Q75LS8 142 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 LPGAT1Q92604 370 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 FAM149B1Q96BN6 582 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 DTLQ9NZJ0 730 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 DNMT3LQ9UJW3 386 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 MYRFQ9Y2G1 1151 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 CAB39Q9Y376 341 aaPredicted RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 A8MVJ9 347 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 SSX5O60225 188 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 ATG13O75143 517 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 STAG3L1P0CL83 205 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 ZNF182P17025 639 aaPredicted RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 TFE3P19532 575 aaPredicted RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 DCKP27707 260 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 SERPINB1P30740 379 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 NDST1P52848 882 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 ACAP2Q15057 778 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 GRIK4Q16099 956 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 GEN1Q17RS7 908 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 OTUD1Q5VV17 481 aaPredicted RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 PLEKHG7Q6ZR37 379 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 PQLC1Q8N2U9 271 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 TMEM151AQ8N4L1 468 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 NT5C3BQ969T7 300 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 RPF1Q9H9Y2 349 aaKnown RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 CXorf21Q9HAI6 301 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 ZDHHC4Q9NPG8 344 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 DIABLOQ9NR28 239 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 DCDC2Q9UHG0 476 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 BAG5Q9UL15 447 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 AP1M2Q9Y6Q5 423 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 RNF103O00237 685 aa10.74□□□□□ -0.69
SND1-201ENST00000354725 NOP56O00567 594 aaKnown RBP10.74□□□□□ -0.69
SND1-201ENST00000354725 TOR1AO14656 332 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms