RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 CTBP1Q13363 440 aa13.61□□□□□ -0.23
SYDE1-201ENST00000342784 ZNF404Q494X3 552 aa13.61□□□□□ -0.23
SYDE1-201ENST00000342784 NBPF12Q5TAG4 269 aaPredicted RBP13.61□□□□□ -0.23
SYDE1-201ENST00000342784 PYROXD2Q8N2H3 581 aa13.61□□□□□ -0.23
SYDE1-201ENST00000342784 FAM151AQ8WW52 585 aa13.61□□□□□ -0.23
SYDE1-201ENST00000342784 JPH3Q8WXH2 748 aaPredicted RBP13.61□□□□□ -0.23
SYDE1-201ENST00000342784 TUBGCP3Q96CW5 907 aa13.61□□□□□ -0.23
SYDE1-201ENST00000342784 PDCD2LQ9BRP1 358 aa13.61□□□□□ -0.23
SYDE1-201ENST00000342784 PDLIM7Q9NR12 457 aa13.61□□□□□ -0.23
SYDE1-201ENST00000342784 IPO13O94829 963 aaKnown RBP13.6□□□□□ -0.23
SYDE1-201ENST00000342784 PGK1P00558 417 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 GPX3P22352 226 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 KCNK10P57789 538 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 KCNAB2Q13303 367 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 GOLGA7BQ2TAP0 167 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 FAM98BQ52LJ0 330 aaKnown RBP13.6□□□□□ -0.23
SYDE1-201ENST00000342784 SIMC1Q8NDZ2 872 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 EXT2Q93063 718 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 PORCNQ9H237 461 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 DCSTAMPQ9H295 470 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 AKTIPQ9H8T0 292 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 TNFRSF12AQ9NP84 129 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 UBXN8O00124 270 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 POLR1CO15160 346 aaPredicted RBP13.6□□□□□ -0.23
SYDE1-201ENST00000342784 AXIN1O15169 862 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 NDST3O95803 873 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 ANGPTL1O95841 491 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 ATP4BP51164 291 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 SLC6A3Q01959 620 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 CBX2Q14781 532 aaPredicted RBP13.6□□□□□ -0.23
SYDE1-201ENST00000342784 TYSND1Q2T9J0 566 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 ZNF470Q6ECI4 717 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 SPESP1Q6UW49 350 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 METTL4Q8N3J2 472 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 SLC22A8Q8TCC7 542 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 FAR1Q8WVX9 515 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 MRIQ9BWK5 157 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 NUAK2Q9H093 628 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 KAT8Q9H7Z6 458 aaKnown RBP13.6□□□□□ -0.23
SYDE1-201ENST00000342784 JPH1Q9HDC5 661 aaPredicted RBP13.6□□□□□ -0.23
SYDE1-201ENST00000342784 SCN3BQ9NY72 215 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 UBP1Q9NZI7 540 aa13.6□□□□□ -0.23
SYDE1-201ENST00000342784 TYW5A2RUC4 315 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 EFCAB9A8MZ26 197 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TARM1B6A8C7 271 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 DPYSL4O14531 572 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 AP2A1O95782 977 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 FADS2O95864 444 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 AHSGP02765 367 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 EDN1P05305 212 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 SLC26A3P40879 764 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 ACOX1Q15067 660 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 CTU2Q2VPK5 515 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 PYCR3Q53H96 274 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 SHEQ5VZ18 495 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 FAM131BQ86XD5 332 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 RPL3LQ92901 407 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 NXPE3Q969Y0 559 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TMEM74Q96NL1 305 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TRIM54Q9BYV2 358 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 BTBD3Q9Y2F9 522 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 A0A1W2PQ72 361 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 FXYD1O00168 92 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 MEN1O00255 615 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 GAS2O43903 313 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 RNGTTO60942 597 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 SLC4A1P02730 911 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 ALDOCP09972 364 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TCF3P15923 654 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 FMO4P31512 558 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 GALK2Q01415 458 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TAGLNQ01995 201 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TRIP4Q15650 581 aaPredicted RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 FAM219BQ5XKK7 198 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 GLYATQ6IB77 296 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 KCTD20Q7Z5Y7 419 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 CEP97Q8IW35 865 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TTLQ8NG68 377 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 FAM49AQ9H0Q0 323 aaPredicted RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TRMT13Q9NUP7 481 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TOR4AQ9NXH8 423 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 ERVK-18Q9QC07 812 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TPRKBQ9Y3C4 175 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 SPEGQ15772 3267 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 PRRC2BQ5JSZ5 2229 aaKnown RBP13.59□□□□□ -0.23
SYDE1-201ENST00000342784 A8MT66 165 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 H3BMM5 538 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 CILPO75339 1184 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 CRCPO75575 148 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 ITGB3P05106 788 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 SLC9A3P48764 834 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 CLCNKBP51801 687 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 TAS2R39P59534 338 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 DNAJB13P59910 316 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 SNTA1Q13424 505 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 CYP20A1Q6UW02 462 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 LYPD8Q6UX82 237 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 IDO2Q6ZQW0 420 aa13.59□□□□□ -0.23
SYDE1-201ENST00000342784 LARP4Q71RC2 724 aaKnown RBP eCLIP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms