RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SLCO1B3Q9NPD5 702 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM49BQ9NUQ9 324 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CDV3Q9UKY7 258 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MGAT4AQ9UM21 535 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MAN2B2Q9Y2E5 1009 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 SCO1O75880 301 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 NDST3O95803 873 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CXCR2P25025 360 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 STOMP27105 288 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MAGEA12P43365 314 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CDH15P55291 814 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 GRIK4Q16099 956 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 SPRED3Q2MJR0 410 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CDNFQ49AH0 187 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 PCID2Q5JVF3 399 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM111BQ6SJ93 734 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 HHIPL2Q6UWX4 724 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MEIOBQ8N635 442 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF781Q8N8C0 355 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 GDPD1Q8N9F7 314 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 OR52N1Q8NH53 320 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 RHBDF1Q96CC6 855 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM47Q9BQJ4 181 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 DNTTIP1Q9H147 329 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 GOLPH3Q9H4A6 298 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 RAD18Q9NS91 495 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 KIAA1522Q9P206 1035 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC7A8Q9UHI5 535 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 OR2AT4A6NND4 320 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 DDX39AO00148 427 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 FHP07954 510 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ALDH7A1P49419 539 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ACTR2P61160 394 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 BEX3Q00994 111 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ACOX1Q15067 660 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM31Q5JXX7 168 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM26FQ5R3K3 315 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 SPOUT1Q5T280 376 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 THAP6Q8TBB0 222 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 SETD6Q8TBK2 473 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF384Q8TF68 577 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ADI1Q9BV57 179 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TUBB1Q9H4B7 451 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CTPS2Q9NRF8 586 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 NCKIPSDQ9NZQ3 722 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF230Q9UIE0 474 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CDH7Q9ULB5 785 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 RGS14O43566 566 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 EFCAB14O75071 495 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CYP17A1P05093 508 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 COILP38432 576 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MNDAP41218 407 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 BCAR1P56945 870 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 AP3S2P59780 193 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 PTENP60484 403 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 OXA1LQ15070 435 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 PSMD5Q16401 504 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 PPP1R3AQ16821 1122 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 INO80DQ53TQ3 878 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ATPAF1Q5TC12 328 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MLIPQ5VWP3 458 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 LRRN1Q6UXK5 716 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 NIPA1Q7RTP0 329 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 DCUN1D3Q8IWE4 304 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CPA6Q8N4T0 437 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 SNX33Q8WV41 574 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TAAR8Q969N4 342 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CREB3L1Q96BA8 519 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 MED18Q9BUE0 208 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TLR10Q9BXR5 811 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 C3orf14Q9HBI5 128 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 ARHGEF4Q9NR80 690 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 PCDHB8Q9UN66 801 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 NCKAP1Q9Y2A7 1128 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 RNF215Q9Y6U7 377 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 DUSP10Q9Y6W6 482 aa6.7□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM210A6NLX4 147 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC28A1O00337 649 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 SCAMP2O15127 329 aaKnown RBP6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 LILRB5O75023 590 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 ARSDP51689 593 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 MERTKQ12866 999 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF362Q5T0B9 420 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM46CQ5VWP2 391 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 DESI1Q6ICB0 168 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 P4HA3Q7Z4N8 544 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC9A9Q8IVB4 645 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 ABHD11Q8NFV4 315 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 TPCN2Q8NHX9 752 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 TBCKQ8TEA7 893 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 APBB2Q92870 758 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 OPALINQ96PE5 141 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 GAL3ST4Q96RP7 486 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 RIT2Q99578 217 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 WDR41Q9HAD4 459 aa6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 FBXO6Q9NRD1 293 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-201ENST00000257290 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms