RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Adgrg3Q8R0T6 542 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mcoln3Q8R4F0 553 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pqbp1Q91VJ5 263 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 NlnQ91YP2 704 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Lrrc40Q9CRC8 602 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Alg13Q9D8C3 1166 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Hipk3Q9ERH7 1192 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 TriqkB2B9E1 86 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Vmn2r67K7N6T2 851 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Vmn2r2L7N2E9 908 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 RxraP28700 467 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Serpina5P70458 405 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 InipQ3TXT3 104 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cyp2c66Q5GLZ0 490 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Creb3Q61817 404 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Nim1kQ8BHI9 436 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 R3hcc1lQ8BJM3 775 aaKnown RBP11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Sfr1Q8BP27 319 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr695Q8VFM3 315 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Setd7Q8VHL1 366 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Lgals12Q91VD1 314 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Stard13Q923Q2 1113 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 March2Q99M02 246 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Snrnp48Q9D361 337 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 LrgukQ9D5S7 820 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Arl10Q9QXJ4 243 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 CtszQ9WUU7 306 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mrpl40Q9Z2Q5 206 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Smok4aA0JLX3 433 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ttll9A2APC3 461 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Lipo4D3Z608 396 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Spaca6E9Q8Q8 339 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Map2k3O09110 347 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 ClppO88696 272 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Htr5bP31387 370 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gp1bbP56400 206 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 TgfbiP82198 683 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc22a15Q504N2 544 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Nr2c1Q505F1 590 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 SyncripQ7TMK9 623 aaKnown RBP11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tmem62Q8BXJ9 643 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ugt2b34Q8K154 532 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Zdhhc12Q8VC90 267 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr330Q8VGD9 315 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Imp4Q8VHZ7 291 aaKnown RBP11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fig4Q91WF7 907 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Scd3Q99PL7 359 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Dnajb4Q9D832 337 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 IgtpQ9DCE9 423 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Akap8lQ9R0L7 642 aaKnown RBP11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Padi4Q9Z183 666 aa11.48□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Itih4A6X935 942 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Krt83E9Q1Y9 479 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm3636E9Q5P1 227 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Vmn2r38G3UYA8 861 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Vmn2r33K7N705 861 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Limk2O54785 638 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 WarsP32921 481 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Lsm3P62311 102 aaKnown RBP11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 StacP97306 403 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 IqcmQ149I8 489 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fam171bQ14CH0 825 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 UrgcpQ5NCI0 926 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mapk10Q61831 464 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Nfe2l1Q61985 741 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Rbl1Q64701 1063 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Krt72Q6IME9 520 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Dusp11Q6NXK5 321 aaKnown RBP11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cdc14bQ6PFY9 485 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fut11Q8BHC9 489 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ctxn3Q8BXZ0 80 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ttc39cQ8VE09 580 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Znf24Q91VN1 368 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pcdhga4Q91XY4 930 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gjd3Q91YD1 278 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc35a5Q921R7 437 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Snx2Q9CWK8 519 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ndufaf4Q9D1H6 173 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Q9D1K7 174 aaKnown RBP11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 PacrglQ9D3X5 248 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Bpifa3Q9D9J8 232 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ndst3Q9EQH7 873 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pik3cgQ9JHG7 1102 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Plod2Q9R0B9 737 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Zdbf2Q5SS00 2493 aaKnown RBP11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mroh7A2AVR2 1279 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm7073E9QAS1 335 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm8011K7N6Y5 207 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Polr2jO08740 117 aaKnown RBP11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 TpmtO55060 240 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ldb2O55203 373 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Klf10O89091 479 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 P01652 108 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gsta1P13745 223 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 C2P21180 760 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tnfsf4P43488 198 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tuba1cP68373 449 aaKnown RBP11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cdh6P97326 790 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Psme2P97372 239 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gsta1Q6P8Q0 223 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms