RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Fam83aQ8K2P2 436 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sirt3Q8R104 334 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Adgrf1Q8VEC3 908 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr866Q8VFI7 312 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr589Q8VGV8 317 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 AasdhpptQ9CQF6 309 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Q9CR55 154 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Snx2Q9CWK8 519 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lrrc17Q9CXD9 443 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 CtszQ9WUU7 306 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Igkv5-45A0A0B4J1J1 115 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lipo4D3Z608 396 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Vmn2r2L7N2E9 908 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 RfngO09009 332 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Htr5bP31387 370 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 PuraP42669 321 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lhx3P50481 400 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Inf2Q0GNC1 1273 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Yy2Q3TTC2 378 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Prss53Q571E5 552 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cyp2c66Q5GLZ0 490 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rbl1Q64701 1063 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Kir3dl2Q673W2 388 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rundc3bQ6PDC0 408 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Clec7aQ6QLQ4 244 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 SyncripQ7TMK9 623 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Trim62Q80V85 475 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lrch3Q8BVU0 778 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Parp12Q8BZ20 711 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mtmr14Q8VEL2 648 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gjd3Q91YD1 278 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Q922M7 232 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Scd3Q99PL7 359 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Atad1Q9D5T0 361 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 2010109A12RikQ9D875 119 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Alg13Q9D8C3 1166 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olig2Q9EQW6 323 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 NfkbizQ9EST8 728 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Aldh1a3Q9JHW9 512 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 M1apQ9Z0E1 529 aa9.72□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 1700011I03RikE9PYL8 271 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Vmn2r38G3UYA8 861 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Arfip1G5E8V9 373 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm21738J3QP72 227 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Vmn2r33K7N705 861 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Capn5O08688 640 aaKnown RBP9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Polr2jO08740 117 aaKnown RBP9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Serpinb2P12388 415 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Arl1P61211 181 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Trappc9Q3U0M1 1148 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zmat1Q3V0C1 714 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Abcb7Q61102 752 aaKnown RBP9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Creb3Q61817 404 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 A4galtQ67BJ4 359 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tmtc4Q8BG19 741 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Morc4Q8BMD7 928 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tmem62Q8BXJ9 643 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Hacd3Q8K2C9 362 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sbk1Q8QZX0 417 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mcoln3Q8R4F0 553 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 AcmsdQ8R519 336 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gins4Q99LZ3 223 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tspan11Q9D1D1 253 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 PacrglQ9D3X5 248 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Oser1Q9D722 291 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fads3Q9JJE7 449 aa9.71□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Itga8A2ARA8 1062 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gm13212B1ASQ7 799 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gp1bbP56400 206 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pex11gQ6P6M5 241 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Tas2r106Q7M724 308 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pnpla8Q8K1N1 776 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 IlkapQ8R0F6 392 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Diras1Q91Z61 198 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Syt12Q920N7 421 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Sdcbp2Q99JZ0 292 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Hipk3Q9ERH7 1192 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Hs6st1Q9QYK5 411 aa9.71□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Lcn6A2AJB9 181 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Lgr4A2ARI4 951 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Tmem45a2B7ZWJ5 289 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gm4871D3Z0W7 314 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zfp938E9Q9G3 579 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gm13128L7MU96 475 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 TpmtO55060 240 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Usp2O88623 613 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Klf10O89091 479 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 C1qbP14106 253 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Tap1P21958 724 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Trmt10cQ3UFY8 414 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fam20cQ5MJS3 579 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Lpcat4Q6NVG1 524 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zfp418Q8BFS8 652 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Znf784Q8BI69 297 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Vrk2Q8BN21 503 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Thop1Q8C1A5 687 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Nle1Q8VEJ4 485 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr665Q8VG79 316 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr330Q8VGD9 315 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fig4Q91WF7 907 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 90.6 ms