RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W GDH3P39708 457 aa2.91□□□□□ -1.94
VPS16YPL045W MTR4P47047 1073 aaKnown RBP2.91□□□□□ -1.94
VPS16YPL045W YDL124WQ07551 312 aaKnown RBP2.91□□□□□ -1.94
VPS16YPL045W YOR378WQ08902 515 aa2.91□□□□□ -1.94
VPS16YPL045W YPL066WQ12194 479 aa2.91□□□□□ -1.94
VPS16YPL045W ARG82P07250 355 aa2.9□□□□□ -1.94
VPS16YPL045W CDC11P32458 415 aa2.9□□□□□ -1.94
VPS16YPL045W PIN4P34217 668 aaKnown RBP RIP-Chip data2.9□□□□□ -1.94not detected
VPS16YPL045W AMN1P38285 549 aaPredicted RBP2.9□□□□□ -1.94
VPS16YPL045W EXO5P38289 585 aa2.9□□□□□ -1.94
VPS16YPL045W SHU2P38957 223 aa2.9□□□□□ -1.94
VPS16YPL045W MBP1P39678 833 aa2.9□□□□□ -1.94
VPS16YPL045W GEM1P39722 662 aa2.9□□□□□ -1.94
VPS16YPL045W VTC4P47075 721 aa2.9□□□□□ -1.94
VPS16YPL045W PMT3P47190 753 aa2.9□□□□□ -1.94
VPS16YPL045W MSB3P48566 633 aaPredicted RBP2.9□□□□□ -1.94
VPS16YPL045W YNL193WP53870 558 aa2.9□□□□□ -1.94
VPS16YPL045W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.9□□□□□ -1.94not detected
VPS16YPL045W THI73Q07904 523 aa2.9□□□□□ -1.94
VPS16YPL045W DED1P06634 604 aaKnown RBP2.9□□□□□ -1.95
VPS16YPL045W FUS1P11710 512 aa2.9□□□□□ -1.95
VPS16YPL045W PWP2P25635 923 aaKnown RBP2.9□□□□□ -1.95
VPS16YPL045W DLD1P32891 587 aa2.9□□□□□ -1.95
VPS16YPL045W FUI1P38196 639 aa2.9□□□□□ -1.95
VPS16YPL045W YGL176CP46945 554 aa2.9□□□□□ -1.95
VPS16YPL045W CLA4P48562 842 aa2.9□□□□□ -1.95
VPS16YPL045W GPG1P53130 126 aa2.9□□□□□ -1.95
VPS16YPL045W ECM16Q04217 1267 aaKnown RBP2.9□□□□□ -1.95
VPS16YPL045W GIC2Q06648 383 aa2.9□□□□□ -1.95
VPS16YPL045W SLX4Q12098 748 aa2.9□□□□□ -1.95
VPS16YPL045W GLO4Q12320 285 aa2.9□□□□□ -1.95
VPS16YPL045W RKM4Q12504 494 aa2.9□□□□□ -1.95
VPS16YPL045W HBN1Q96VH4 193 aa2.9□□□□□ -1.95
VPS16YPL045W HVG1P0CE11 249 aa2.89□□□□□ -1.95
VPS16YPL045W TOP3P13099 656 aa2.89□□□□□ -1.95
VPS16YPL045W MEF1P25039 761 aa2.89□□□□□ -1.95
VPS16YPL045W SYP1P25623 870 aaKnown RBP2.89□□□□□ -1.95
VPS16YPL045W HBS1P32769 611 aaKnown RBP2.89□□□□□ -1.95
VPS16YPL045W VPS24P36095 224 aaKnown RBP2.89□□□□□ -1.95
VPS16YPL045W YER156CP40093 338 aaKnown RBP2.89□□□□□ -1.95
VPS16YPL045W PPT1P53043 513 aa2.89□□□□□ -1.95
VPS16YPL045W YRB30P53107 440 aaPredicted RBP2.89□□□□□ -1.95
VPS16YPL045W ALO1P54783 526 aaKnown RBP2.89□□□□□ -1.95
VPS16YPL045W RAT1Q02792 1006 aaKnown RBP2.89□□□□□ -1.95
VPS16YPL045W MDM12Q92328 271 aa2.89□□□□□ -1.95
VPS16YPL045W YKL107WP34251 309 aa2.89□□□□□ -1.95
VPS16YPL045W VRP1P37370 817 aa2.89□□□□□ -1.95
VPS16YPL045W NIT1P40447 199 aa2.89□□□□□ -1.95
VPS16YPL045W UME1Q03010 460 aa2.89□□□□□ -1.95
VPS16YPL045W SND1Q04007 877 aa2.89□□□□□ -1.95
VPS16YPL045W EST2Q06163 884 aa2.89□□□□□ -1.95
VPS16YPL045W YDL121CQ07541 149 aa2.89□□□□□ -1.95
VPS16YPL045W HTS1P07263 546 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W IDI1P15496 288 aa2.88□□□□□ -1.95
VPS16YPL045W TRX2P22803 104 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W YKL077WP36081 392 aa2.88□□□□□ -1.95
VPS16YPL045W NCL1P38205 684 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W PAN5P38787 379 aa2.88□□□□□ -1.95
VPS16YPL045W CCC2P38995 1004 aa2.88□□□□□ -1.95
VPS16YPL045W INP51P40559 946 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W CNN1P43618 361 aa2.88□□□□□ -1.95
VPS16YPL045W YJR124CP47159 448 aa2.88□□□□□ -1.95
VPS16YPL045W CEF1Q03654 590 aaPredicted RBP2.88□□□□□ -1.95
VPS16YPL045W AOS1Q06624 347 aa2.88□□□□□ -1.95
VPS16YPL045W YLR001CQ07895 862 aa2.88□□□□□ -1.95
VPS16YPL045W GIN4Q12263 1142 aa2.88□□□□□ -1.95
VPS16YPL045W TMA7Q3E764 64 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W NUP145P49687 1317 aa2.88□□□□□ -1.95
VPS16YPL045W SGS1P35187 1447 aa2.88□□□□□ -1.95
VPS16YPL045W THS1P04801 734 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W TY1A-LR4P0C2I8 440 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W TY1A-DR6P0CX70 440 aa2.88□□□□□ -1.95
VPS16YPL045W TY1A-ER1P0CX71 440 aa2.88□□□□□ -1.95
VPS16YPL045W TY1A-LR2P0CX72 440 aa2.88□□□□□ -1.95
VPS16YPL045W TY1A-PLP0CX73 440 aa2.88□□□□□ -1.95
VPS16YPL045W TY1A-JR1P0CX74 440 aa2.88□□□□□ -1.95
VPS16YPL045W TY1A-LR3P0CX75 440 aa2.88□□□□□ -1.95
VPS16YPL045W TY1A-ML2P0CX76 440 aa2.88□□□□□ -1.95
VPS16YPL045W BCK2P33306 851 aa2.88□□□□□ -1.95
VPS16YPL045W SNF7P39929 240 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W SEC26P41810 973 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W SDA1P53313 767 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W BIO5P53744 561 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W YNR065CP53751 1116 aa2.88□□□□□ -1.95
VPS16YPL045W FAP7Q12055 197 aaPredicted RBP2.88□□□□□ -1.95
VPS16YPL045W TY1A-GR1Q12085 440 aa2.88□□□□□ -1.95
VPS16YPL045W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W TY1A-OLQ92392 440 aaKnown RBP2.88□□□□□ -1.95
VPS16YPL045W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
VPS16YPL045W TOM70P07213 617 aaKnown RBP2.87□□□□□ -1.95
VPS16YPL045W DBP5P20449 482 aaKnown RBP2.87□□□□□ -1.95
VPS16YPL045W AFT1P22149 690 aa2.87□□□□□ -1.95
VPS16YPL045W ASH1P34233 588 aa2.87□□□□□ -1.95
VPS16YPL045W ADD66P36040 267 aa2.87□□□□□ -1.95
VPS16YPL045W TFA2P36145 328 aa2.87□□□□□ -1.95
VPS16YPL045W MRPL16P38064 232 aa2.87□□□□□ -1.95
VPS16YPL045W YBR284WP38150 797 aa2.87□□□□□ -1.95
VPS16YPL045W YBR071WP38243 211 aa2.87□□□□□ -1.95
VPS16YPL045W DSS1P39112 969 aa2.87□□□□□ -1.95
VPS16YPL045W SIP5P40210 489 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms