RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W UTP14Q04500 899 aaKnown RBP5.37□□□□□ -1.55
CTK1YKL139W EAF1Q06337 982 aa5.37□□□□□ -1.55
CTK1YKL139W TY1A-GR1Q12085 440 aa5.37□□□□□ -1.55
CTK1YKL139W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.37□□□□□ -1.55
CTK1YKL139W TY1A-OLQ92392 440 aaKnown RBP5.37□□□□□ -1.55
CTK1YKL139W ARE1P25628 610 aa5.36□□□□□ -1.55
CTK1YKL139W MKK2P32491 506 aa5.36□□□□□ -1.55
CTK1YKL139W MSH4P40965 878 aaPredicted RBP5.36□□□□□ -1.55
CTK1YKL139W EST2Q06163 884 aa5.36□□□□□ -1.55
CTK1YKL139W SOG2Q08817 791 aa5.36□□□□□ -1.55
CTK1YKL139W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
CTK1YKL139W DIT1P21623 536 aa5.35□□□□□ -1.55
CTK1YKL139W GRX4P32642 244 aa5.35□□□□□ -1.55
CTK1YKL139W TOM20P35180 183 aa5.35□□□□□ -1.55
CTK1YKL139W PBY1P38254 753 aa5.35□□□□□ -1.55
CTK1YKL139W PRK1P40494 810 aa5.35□□□□□ -1.55
CTK1YKL139W TIF35Q04067 274 aaKnown RBP5.35□□□□□ -1.55
CTK1YKL139W SYP1P25623 870 aaKnown RBP5.34□□□□□ -1.55
CTK1YKL139W GLY1P37303 387 aaKnown RBP5.34□□□□□ -1.55
CTK1YKL139W NEM1P38757 446 aa5.34□□□□□ -1.55
CTK1YKL139W SCW11P53189 542 aa5.34□□□□□ -1.55
CTK1YKL139W UTP22P53254 1237 aaPredicted RBP5.34□□□□□ -1.55
CTK1YKL139W RAT1Q02792 1006 aaKnown RBP5.34□□□□□ -1.55
CTK1YKL139W YMR265CQ03508 461 aaKnown RBP5.34□□□□□ -1.55
CTK1YKL139W UBX5Q06682 500 aa5.34□□□□□ -1.55
CTK1YKL139W SSB1P11484 613 aaKnown RBP5.33□□□□□ -1.56
CTK1YKL139W FPS1P23900 669 aa5.33□□□□□ -1.56
CTK1YKL139W PUF4P25339 888 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
CTK1YKL139W SSB2P40150 613 aaKnown RBP5.33□□□□□ -1.56
CTK1YKL139W NEO1P40527 1151 aa5.33□□□□□ -1.56
CTK1YKL139W HUL4P40985 892 aa5.33□□□□□ -1.56
CTK1YKL139W SLS1P42900 643 aa5.33□□□□□ -1.56
CTK1YKL139W ALR2P43553 858 aa5.33□□□□□ -1.56
CTK1YKL139W YJR008WP47085 338 aa5.33□□□□□ -1.56
CTK1YKL139W UTP8P53276 713 aaKnown RBP5.33□□□□□ -1.56
CTK1YKL139W HAS1Q03532 505 aaKnown RBP5.33□□□□□ -1.56
CTK1YKL139W TAF8Q03750 510 aa5.33□□□□□ -1.56
CTK1YKL139W UTP5Q04177 643 aaKnown RBP5.33□□□□□ -1.56
CTK1YKL139W TY1A-BLQ12266 440 aa5.33□□□□□ -1.56
CTK1YKL139W ADD66P36040 267 aa5.33□□□□□ -1.56
CTK1YKL139W YGL176CP46945 554 aa5.33□□□□□ -1.56
CTK1YKL139W MTR4P47047 1073 aaKnown RBP5.33□□□□□ -1.56
CTK1YKL139W RTA1P53047 317 aa5.33□□□□□ -1.56
CTK1YKL139W YGL081WP53156 320 aa5.33□□□□□ -1.56
CTK1YKL139W DNM1P54861 757 aa5.33□□□□□ -1.56
CTK1YKL139W AOS1Q06624 347 aa5.33□□□□□ -1.56
CTK1YKL139W YPL066WQ12194 479 aa5.33□□□□□ -1.56
CTK1YKL139W RKM4Q12504 494 aa5.33□□□□□ -1.56
CTK1YKL139W SRM1P21827 482 aa5.32□□□□□ -1.56
CTK1YKL139W PIN4P34217 668 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
CTK1YKL139W YKL107WP34251 309 aa5.32□□□□□ -1.56
CTK1YKL139W MBP1P39678 833 aa5.32□□□□□ -1.56
CTK1YKL139W CUZ1P53899 274 aa5.32□□□□□ -1.56
CTK1YKL139W TY1A-DR2Q03964 440 aaKnown RBP5.32□□□□□ -1.56
CTK1YKL139W YIG1Q08956 461 aa5.32□□□□□ -1.56
CTK1YKL139W NOP14Q99207 810 aaKnown RBP5.32□□□□□ -1.56
CTK1YKL139W PRP9P19736 530 aaKnown RBP5.31□□□□□ -1.56
CTK1YKL139W DBP5P20449 482 aaKnown RBP5.31□□□□□ -1.56
CTK1YKL139W MCM7P38132 845 aa5.31□□□□□ -1.56
CTK1YKL139W UBP12P39538 1254 aa5.31□□□□□ -1.56
CTK1YKL139W CNN1P43618 361 aa5.31□□□□□ -1.56
CTK1YKL139W ATG36P46983 293 aa5.31□□□□□ -1.56
CTK1YKL139W GUP1P53154 560 aa5.31□□□□□ -1.56
CTK1YKL139W MSH2P25847 964 aa5.3□□□□□ -1.56
CTK1YKL139W BET3P36149 193 aa5.3□□□□□ -1.56
CTK1YKL139W CRP1P38845 465 aaKnown RBP5.3□□□□□ -1.56
CTK1YKL139W YNR063WP53749 607 aa5.3□□□□□ -1.56
CTK1YKL139W ADE12P80210 433 aaKnown RBP5.3□□□□□ -1.56
CTK1YKL139W NTG2Q08214 380 aa5.3□□□□□ -1.56
CTK1YKL139W YDL176WQ12027 708 aa5.3□□□□□ -1.56
CTK1YKL139W AFG2P32794 780 aa5.29□□□□□ -1.56
CTK1YKL139W ATG14P38270 344 aa5.29□□□□□ -1.56
CTK1YKL139W YEN1P40028 759 aa5.29□□□□□ -1.56
CTK1YKL139W ROG3P43602 733 aa5.29□□□□□ -1.56
CTK1YKL139W SOK2P53438 785 aaPredicted RBP5.29□□□□□ -1.56
CTK1YKL139W TY1A-MR1Q04215 440 aa5.29□□□□□ -1.56
CTK1YKL139W LCB5Q06147 687 aaKnown RBP5.29□□□□□ -1.56
CTK1YKL139W YDL124WQ07551 312 aaKnown RBP5.29□□□□□ -1.56
CTK1YKL139W ADR1P07248 1323 aa5.29□□□□□ -1.56
CTK1YKL139W SNF7P39929 240 aaKnown RBP5.29□□□□□ -1.56
CTK1YKL139W MPH1P40562 993 aa5.29□□□□□ -1.56
CTK1YKL139W RTS3P53289 263 aa5.29□□□□□ -1.56
CTK1YKL139W RKM2Q03942 479 aa5.29□□□□□ -1.56
CTK1YKL139W YDR461C-AQ2V2P7 80 aa5.29□□□□□ -1.56
CTK1YKL139W ALG3P38179 458 aa5.28□□□□□ -1.56
CTK1YKL139W CCC2P38995 1004 aa5.28□□□□□ -1.56
CTK1YKL139W SPO74P45819 413 aa5.28□□□□□ -1.56
CTK1YKL139W HSV2P50079 448 aaPredicted RBP5.28□□□□□ -1.56
CTK1YKL139W MEC3Q02574 474 aa5.28□□□□□ -1.56
CTK1YKL139W MLS1P30952 554 aa5.27□□□□□ -1.57
CTK1YKL139W ARL1P38116 183 aaKnown RBP5.27□□□□□ -1.57
CTK1YKL139W LEM3P42838 414 aa5.27□□□□□ -1.57
CTK1YKL139W HNT2P49775 206 aa5.27□□□□□ -1.57
CTK1YKL139W LYS5P50113 272 aa5.27□□□□□ -1.57
CTK1YKL139W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
CTK1YKL139W RPL8AP17076 256 aaKnown RBP5.26□□□□□ -1.57
CTK1YKL139W HBS1P32769 611 aaKnown RBP5.26□□□□□ -1.57
CTK1YKL139W REI1P38344 393 aaPredicted RBP5.26□□□□□ -1.57
CTK1YKL139W PAN5P38787 379 aa5.26□□□□□ -1.57
CTK1YKL139W GIP2P40036 548 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms