RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W RPB10P22139 70 aa4.08□□□□□ -1.76
NUP60YAR002W NMD2P38798 1089 aaKnown RBP4.08□□□□□ -1.76
NUP60YAR002W ALD2P47771 506 aa4.08□□□□□ -1.76
NUP60YAR002W YGR122WP53272 402 aa4.08□□□□□ -1.76
NUP60YAR002W YDR306CQ06640 478 aa4.08□□□□□ -1.76
NUP60YAR002W YDL176WQ12027 708 aa4.08□□□□□ -1.76
NUP60YAR002W YKL133CP36066 463 aa4.07□□□□□ -1.76
NUP60YAR002W BOI2P39969 1040 aa4.07□□□□□ -1.76
NUP60YAR002W NKP2Q06162 153 aa4.07□□□□□ -1.76
NUP60YAR002W MSN1P22148 382 aa4.06□□□□□ -1.76
NUP60YAR002W SWC3P31376 625 aa4.06□□□□□ -1.76
NUP60YAR002W GCD7P32502 381 aaPredicted RBP4.06□□□□□ -1.76
NUP60YAR002W KTR2P33550 425 aa4.06□□□□□ -1.76
NUP60YAR002W MRPL16P38064 232 aa4.06□□□□□ -1.76
NUP60YAR002W ISW1P38144 1129 aa4.06□□□□□ -1.76
NUP60YAR002W GIP1P38229 639 aa4.06□□□□□ -1.76
NUP60YAR002W RFC1P38630 861 aaKnown RBP4.06□□□□□ -1.76
NUP60YAR002W SKP1P52286 194 aa4.06□□□□□ -1.76
NUP60YAR002W ZDS2P54786 942 aa4.06□□□□□ -1.76
NUP60YAR002W DNM1P54861 757 aa4.06□□□□□ -1.76
NUP60YAR002W ATG13Q06628 738 aa4.06□□□□□ -1.76
NUP60YAR002W YOR296WQ08748 1289 aa4.06□□□□□ -1.76
NUP60YAR002W STB3Q12427 513 aa4.06□□□□□ -1.76
NUP60YAR002W FRT1Q99332 602 aa4.06□□□□□ -1.76
NUP60YAR002W RAD50P12753 1312 aa4.06□□□□□ -1.76
NUP60YAR002W YRF1-3P0CX14 1859 aa4.06□□□□□ -1.76
NUP60YAR002W YRF1-7P0CX15 1859 aa4.06□□□□□ -1.76
NUP60YAR002W YRF1-6P53819 1859 aa4.06□□□□□ -1.76
NUP60YAR002W ROM2P51862 1356 aaKnown RBP4.06□□□□□ -1.76
NUP60YAR002W PCT1P13259 424 aa4.06□□□□□ -1.76
NUP60YAR002W NUP133P36161 1157 aa4.06□□□□□ -1.76
NUP60YAR002W ACO2P39533 789 aa4.06□□□□□ -1.76
NUP60YAR002W NTA1P40354 457 aa4.06□□□□□ -1.76
NUP60YAR002W ROG3P43602 733 aa4.06□□□□□ -1.76
NUP60YAR002W YBP2P53169 641 aa4.06□□□□□ -1.76
NUP60YAR002W EAF7P53911 425 aaKnown RBP4.06□□□□□ -1.76
NUP60YAR002W NAM8Q00539 523 aaKnown RBP4.06□□□□□ -1.76
NUP60YAR002W CUS1Q02554 436 aaPredicted RBP4.06□□□□□ -1.76
NUP60YAR002W RMT2Q03305 412 aa4.06□□□□□ -1.76
NUP60YAR002W TY1A-MR1Q04215 440 aa4.06□□□□□ -1.76
NUP60YAR002W IMH1Q06704 911 aaKnown RBP4.06□□□□□ -1.76
NUP60YAR002W SWI1P09547 1314 aa4.05□□□□□ -1.76
NUP60YAR002W CDC16P09798 840 aa4.05□□□□□ -1.76
NUP60YAR002W DIT1P21623 536 aa4.05□□□□□ -1.76
NUP60YAR002W ASF1P32447 279 aa4.05□□□□□ -1.76
NUP60YAR002W RAD55P38953 406 aa4.05□□□□□ -1.76
NUP60YAR002W YJR008WP47085 338 aa4.05□□□□□ -1.76
NUP60YAR002W YNL011CP53980 444 aa4.05□□□□□ -1.76
NUP60YAR002W YMR265CQ03508 461 aaKnown RBP4.05□□□□□ -1.76
NUP60YAR002W IRS4P36115 615 aaKnown RBP4.04□□□□□ -1.76
NUP60YAR002W BSD2P38356 321 aa4.04□□□□□ -1.76
NUP60YAR002W APM2P38700 605 aa4.04□□□□□ -1.76
NUP60YAR002W RGD2P43556 714 aa4.04□□□□□ -1.76
NUP60YAR002W VPS64Q03944 604 aa4.04□□□□□ -1.76
NUP60YAR002W SSP2Q08646 371 aa4.04□□□□□ -1.76
NUP60YAR002W BRN1P38170 754 aa4.03□□□□□ -1.76
NUP60YAR002W NCL1P38205 684 aaKnown RBP4.03□□□□□ -1.76
NUP60YAR002W YIR007WP40566 764 aa4.03□□□□□ -1.76
NUP60YAR002W CAF120P53836 1060 aa4.03□□□□□ -1.76
NUP60YAR002W CUZ1P53899 274 aa4.03□□□□□ -1.76
NUP60YAR002W CDC55Q00362 526 aa4.03□□□□□ -1.76
NUP60YAR002W RSC4Q02206 625 aa4.03□□□□□ -1.76
NUP60YAR002W MNL2Q12205 849 aa4.03□□□□□ -1.76
NUP60YAR002W COBP00163 385 aa4.03□□□□□ -1.77
NUP60YAR002W LPD1P09624 499 aaKnown RBP4.03□□□□□ -1.77
NUP60YAR002W NAB2P32505 525 aaKnown RBP RIP-Chip data4.03□□□□□ -1.77not detected
NUP60YAR002W AIM46P38885 310 aa4.03□□□□□ -1.77
NUP60YAR002W UBP12P39538 1254 aa4.03□□□□□ -1.77
NUP60YAR002W PSY2P40164 858 aa4.03□□□□□ -1.77
NUP60YAR002W DOT5P40553 215 aa4.03□□□□□ -1.77
NUP60YAR002W KRE33P53914 1056 aaKnown RBP4.03□□□□□ -1.77
NUP60YAR002W HEH2Q03281 663 aa4.03□□□□□ -1.77
NUP60YAR002W WHI5Q12416 295 aa4.03□□□□□ -1.77
NUP60YAR002W VAS1P07806 1104 aaKnown RBP4.02□□□□□ -1.77
NUP60YAR002W CLC1P17891 233 aa4.02□□□□□ -1.77
NUP60YAR002W FPS1P23900 669 aa4.02□□□□□ -1.77
NUP60YAR002W GRX1P25373 110 aaKnown RBP4.02□□□□□ -1.77
NUP60YAR002W MET4P32389 672 aa4.02□□□□□ -1.77
NUP60YAR002W APL2P36000 726 aaPredicted RBP4.02□□□□□ -1.77
NUP60YAR002W VPS24P36095 224 aaKnown RBP4.02□□□□□ -1.77
NUP60YAR002W YKR075CP36155 307 aa4.02□□□□□ -1.77
NUP60YAR002W SNF7P39929 240 aaKnown RBP4.02□□□□□ -1.77
NUP60YAR002W SAM37P50110 327 aa4.02□□□□□ -1.77
NUP60YAR002W ITC1P53125 1264 aa4.02□□□□□ -1.77
NUP60YAR002W MDG1P53885 366 aa4.02□□□□□ -1.77
NUP60YAR002W GPI13Q07830 1017 aa4.02□□□□□ -1.77
NUP60YAR002W TIF6Q12522 245 aaKnown RBP4.02□□□□□ -1.77
NUP60YAR002W YDR461C-AQ2V2P7 80 aa4.02□□□□□ -1.77
NUP60YAR002W NCB2Q92317 146 aa4.02□□□□□ -1.77
NUP60YAR002W CCP1P00431 361 aa4.01□□□□□ -1.77
NUP60YAR002W GCD6P32501 712 aaKnown RBP4.01□□□□□ -1.77
NUP60YAR002W CEM1P39525 442 aa4.01□□□□□ -1.77
NUP60YAR002W HXT13P39924 564 aa4.01□□□□□ -1.77
NUP60YAR002W YIL165CP40446 119 aa4.01□□□□□ -1.77
NUP60YAR002W YNR040WP53736 256 aa4.01□□□□□ -1.77
NUP60YAR002W ADE12P80210 433 aaKnown RBP4.01□□□□□ -1.77
NUP60YAR002W BSC2Q05611 235 aa4.01□□□□□ -1.77
NUP60YAR002W LSP1Q12230 341 aaKnown RBP4.01□□□□□ -1.77
NUP60YAR002W PHM7Q12252 991 aa4.01□□□□□ -1.77
NUP60YAR002W NOT3P06102 836 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms