RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
PHGDH-224ENST00000641711 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
PHGDH-224ENST00000641711 DIAPH1O60610 1272 aaKnown RBP13.54□□□□□ -0.24
PHGDH-224ENST00000641711 IL13P35225 146 aa13.54□□□□□ -0.24
PHGDH-224ENST00000641711 SEPT12Q8IYM1 358 aa13.54□□□□□ -0.24
PHGDH-224ENST00000641711 LTV1Q96GA3 475 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-224ENST00000641711 BCL9O00512 1426 aa13.54□□□□□ -0.24
PHGDH-224ENST00000641711 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
PHGDH-224ENST00000641711 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
PHGDH-224ENST00000641711 EYA1Q99502 592 aa13.53□□□□□ -0.24
PHGDH-224ENST00000641711 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
PHGDH-224ENST00000641711 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
PHGDH-224ENST00000641711 RAPGEF4Q8WZA2 1011 aa13.52□□□□□ -0.25
PHGDH-224ENST00000641711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.25
PHGDH-224ENST00000641711 MEGF6O75095 1541 aa13.52□□□□□ -0.25
PHGDH-224ENST00000641711 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-224ENST00000641711 DDB1Q16531 1140 aa13.51□□□□□ -0.25
PHGDH-224ENST00000641711 A0A0G2JS52 829 aa13.5□□□□□ -0.25
PHGDH-224ENST00000641711 MYT1Q01538 1121 aa13.5□□□□□ -0.25
PHGDH-224ENST00000641711 KRT27Q7Z3Y8 459 aa13.5□□□□□ -0.25
PHGDH-224ENST00000641711 ADAMTS8Q9UP79 889 aa13.5□□□□□ -0.25
PHGDH-224ENST00000641711 EXOC5O00471 708 aa13.49□□□□□ -0.25
PHGDH-224ENST00000641711 WDR43Q15061 677 aaKnown RBP eCLIP13.49□□□□□ -0.25
PHGDH-224ENST00000641711 PPP4R2Q9NY27 417 aa13.49□□□□□ -0.25
PHGDH-224ENST00000641711 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
PHGDH-224ENST00000641711 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
PHGDH-224ENST00000641711 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
PHGDH-224ENST00000641711 AMOTQ4VCS5 1084 aa13.47□□□□□ -0.25
PHGDH-224ENST00000641711 NGEFQ8N5V2 710 aa13.47□□□□□ -0.25
PHGDH-224ENST00000641711 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
PHGDH-224ENST00000641711 USHBP1Q8N6Y0 703 aa13.46□□□□□ -0.25
PHGDH-224ENST00000641711 ZCRB1Q8TBF4 217 aaKnown RBP13.46□□□□□ -0.25
PHGDH-224ENST00000641711 PNNQ9H307 717 aaKnown RBP13.46□□□□□ -0.25
PHGDH-224ENST00000641711 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
PHGDH-224ENST00000641711 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
PHGDH-224ENST00000641711 FCHSD2O94868 740 aa13.45□□□□□ -0.26
PHGDH-224ENST00000641711 FAM196AQ6ZSG2 479 aa13.45□□□□□ -0.26
PHGDH-224ENST00000641711 ILDR2Q71H61 639 aa13.45□□□□□ -0.26
PHGDH-224ENST00000641711 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-224ENST00000641711 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
PHGDH-224ENST00000641711 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
PHGDH-224ENST00000641711 ZNF521Q96K83 1311 aa13.44□□□□□ -0.26
PHGDH-224ENST00000641711 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
PHGDH-224ENST00000641711 IRX6P78412 446 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-224ENST00000641711 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-224ENST00000641711 U2AF1L5P0DN76 240 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-224ENST00000641711 U2AF1Q01081 240 aaKnown RBP eCLIP13.43□□□□□ -0.26
PHGDH-224ENST00000641711 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
PHGDH-224ENST00000641711 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
PHGDH-224ENST00000641711 TNS1Q9HBL0 1735 aaKnown RBP13.43□□□□□ -0.26
PHGDH-224ENST00000641711 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
PHGDH-224ENST00000641711 ADAMTS7Q9UKP4 1686 aa13.43□□□□□ -0.26
PHGDH-224ENST00000641711 NEFMP07197 916 aa13.42□□□□□ -0.26
PHGDH-224ENST00000641711 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
PHGDH-224ENST00000641711 AEBP1Q8IUX7 1158 aa13.42□□□□□ -0.26
PHGDH-224ENST00000641711 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-224ENST00000641711 RSPH6AQ9H0K4 717 aa13.42□□□□□ -0.26
PHGDH-224ENST00000641711 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
PHGDH-224ENST00000641711 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
PHGDH-224ENST00000641711 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
PHGDH-224ENST00000641711 GAS2L2Q8NHY3 880 aa13.41□□□□□ -0.26
PHGDH-224ENST00000641711 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
PHGDH-224ENST00000641711 HMOX1P09601 288 aa13.4□□□□□ -0.26
PHGDH-224ENST00000641711 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-224ENST00000641711 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
PHGDH-224ENST00000641711 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
PHGDH-224ENST00000641711 ITGB4P16144 1822 aa13.39□□□□□ -0.27
PHGDH-224ENST00000641711 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
PHGDH-224ENST00000641711 CYP27B1O15528 508 aa13.39□□□□□ -0.27
PHGDH-224ENST00000641711 RRP1P56182 461 aaKnown RBP13.39□□□□□ -0.27
PHGDH-224ENST00000641711 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
PHGDH-224ENST00000641711 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
PHGDH-224ENST00000641711 SALL2Q9Y467 1007 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-224ENST00000641711 EP400Q96L91 3159 aa13.38□□□□□ -0.27
PHGDH-224ENST00000641711 MRC1P22897 1456 aa13.38□□□□□ -0.27
PHGDH-224ENST00000641711 PHKG2P15735 406 aa13.38□□□□□ -0.27
PHGDH-224ENST00000641711 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
PHGDH-224ENST00000641711 AKAP4Q5JQC9 854 aa13.38□□□□□ -0.27
PHGDH-224ENST00000641711 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-224ENST00000641711 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
PHGDH-224ENST00000641711 BTAF1O14981 1849 aa13.38□□□□□ -0.27
PHGDH-224ENST00000641711 SOCS7O14512 581 aa13.37□□□□□ -0.27
PHGDH-224ENST00000641711 TRMT2AQ8IZ69 625 aaKnown RBP13.37□□□□□ -0.27
PHGDH-224ENST00000641711 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
PHGDH-224ENST00000641711 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
PHGDH-224ENST00000641711 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
PHGDH-224ENST00000641711 MAP3K5Q99683 1374 aa13.36□□□□□ -0.27
PHGDH-224ENST00000641711 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
PHGDH-224ENST00000641711 DUSP27Q5VZP5 1158 aa13.36□□□□□ -0.27
PHGDH-224ENST00000641711 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-224ENST00000641711 HTATSF1O43719 755 aaKnown RBP13.35□□□□□ -0.27
PHGDH-224ENST00000641711 SLFN5Q08AF3 891 aa13.35□□□□□ -0.27
PHGDH-224ENST00000641711 SF3B2Q13435 895 aaKnown RBP13.35□□□□□ -0.27
PHGDH-224ENST00000641711 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
PHGDH-224ENST00000641711 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
PHGDH-224ENST00000641711 KDM6AO15550 1401 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-224ENST00000641711 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
PHGDH-224ENST00000641711 APAF1O14727 1248 aa13.34□□□□□ -0.27
PHGDH-224ENST00000641711 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
PHGDH-224ENST00000641711 SIPA1L3O60292 1781 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms