RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 KIF27Q86VH2 1401 aa9.88□□□□□ -0.83
ATM-229ENST00000639953 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
ATM-229ENST00000639953 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
ATM-229ENST00000639953 FIGNL2A6NMB9 653 aa9.86□□□□□ -0.83
ATM-229ENST00000639953 FHAD1B1AJZ9 1412 aa9.86□□□□□ -0.83
ATM-229ENST00000639953 IGF1RP08069 1367 aa9.86□□□□□ -0.83
ATM-229ENST00000639953 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
ATM-229ENST00000639953 ZC3H4Q9UPT8 1303 aaKnown RBP9.85□□□□□ -0.83
ATM-229ENST00000639953 PPFIA3O75145 1194 aa9.85□□□□□ -0.83
ATM-229ENST00000639953 INTS6LQ5JSJ4 861 aaKnown RBP9.85□□□□□ -0.83
ATM-229ENST00000639953 Q6ZVU0 165 aa9.85□□□□□ -0.83
ATM-229ENST00000639953 PCMTD1Q96MG8 357 aaPredicted RBP9.85□□□□□ -0.83
ATM-229ENST00000639953 AGBL1Q96MI9 1066 aa9.85□□□□□ -0.83
ATM-229ENST00000639953 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
ATM-229ENST00000639953 CLASP1Q7Z460 1538 aa9.84□□□□□ -0.83
ATM-229ENST00000639953 RAB15P59190 212 aa9.84□□□□□ -0.83
ATM-229ENST00000639953 TRIM34Q9BYJ4 488 aa9.84□□□□□ -0.83
ATM-229ENST00000639953 TMPRSS4Q9NRS4 437 aa9.84□□□□□ -0.83
ATM-229ENST00000639953 CEP170Q5SW79 1584 aa9.84□□□□□ -0.83
ATM-229ENST00000639953 CDV3Q9UKY7 258 aaKnown RBP9.83□□□□□ -0.84
ATM-229ENST00000639953 GPSM3Q9Y4H4 160 aa9.83□□□□□ -0.84
ATM-229ENST00000639953 CUL7Q14999 1698 aa9.83□□□□□ -0.84
ATM-229ENST00000639953 RIMBP3CA6NJZ7 1639 aa9.82□□□□□ -0.84
ATM-229ENST00000639953 RIMBP3BA6NNM3 1639 aa9.82□□□□□ -0.84
ATM-229ENST00000639953 RIMBP3Q9UFD9 1639 aa9.82□□□□□ -0.84
ATM-229ENST00000639953 FAM9AQ8IZU1 332 aaPredicted RBP9.82□□□□□ -0.84
ATM-229ENST00000639953 GOPCQ9HD26 462 aa9.82□□□□□ -0.84
ATM-229ENST00000639953 TTLL8A6PVC2 850 aa9.81□□□□□ -0.84
ATM-229ENST00000639953 RELBQ01201 579 aa9.81□□□□□ -0.84
ATM-229ENST00000639953 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
ATM-229ENST00000639953 ZSCAN1Q8NBB4 408 aa9.81□□□□□ -0.84
ATM-229ENST00000639953 CARMIL1Q5VZK9 1371 aa9.8□□□□□ -0.84
ATM-229ENST00000639953 SPINT1O43278 529 aa9.8□□□□□ -0.84
ATM-229ENST00000639953 DHX9Q08211 1270 aaKnown RBP9.8□□□□□ -0.84
ATM-229ENST00000639953 ARHGEF11O15085 1522 aa9.8□□□□□ -0.84
ATM-229ENST00000639953 NUP160Q12769 1436 aa9.8□□□□□ -0.84
ATM-229ENST00000639953 ADD1P35611 737 aaKnown RBP9.79□□□□□ -0.84
ATM-229ENST00000639953 TMEM259Q4ZIN3 620 aa9.79□□□□□ -0.84
ATM-229ENST00000639953 ZNF395Q9H8N7 513 aaPredicted RBP9.79□□□□□ -0.84
ATM-229ENST00000639953 ERVH48-1M5A8F1 160 aa9.78□□□□□ -0.84
ATM-229ENST00000639953 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
ATM-229ENST00000639953 CTSOP43234 321 aaPredicted RBP9.78□□□□□ -0.84
ATM-229ENST00000639953 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
ATM-229ENST00000639953 PTSQ03393 145 aa9.78□□□□□ -0.84
ATM-229ENST00000639953 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.78□□□□□ -0.84
ATM-229ENST00000639953 GPR161Q8N6U8 529 aaKnown RBP9.78□□□□□ -0.84
ATM-229ENST00000639953 PNMA1Q8ND90 353 aa9.78□□□□□ -0.84
ATM-229ENST00000639953 ZNF784Q8NCA9 323 aaPredicted RBP9.77□□□□□ -0.85
ATM-229ENST00000639953 INSM2Q96T92 566 aaPredicted RBP9.77□□□□□ -0.85
ATM-229ENST00000639953 ERCC6L2Q5T890 1561 aa9.76□□□□□ -0.85
ATM-229ENST00000639953 LILRA1O75019 489 aa9.76□□□□□ -0.85
ATM-229ENST00000639953 GJD4Q96KN9 370 aaPredicted RBP9.76□□□□□ -0.85
ATM-229ENST00000639953 NBPF20Q3BBV1 942 aa9.75□□□□□ -0.85
ATM-229ENST00000639953 KDF1Q8NAX2 398 aaPredicted RBP9.75□□□□□ -0.85
ATM-229ENST00000639953 RAPGEF2Q9Y4G8 1499 aa9.74□□□□□ -0.85
ATM-229ENST00000639953 ESPNB1AK53 854 aa9.74□□□□□ -0.85
ATM-229ENST00000639953 GIGYF1O75420 1035 aaPredicted RBP9.74□□□□□ -0.85
ATM-229ENST00000639953 SHROOM2Q13796 1616 aa9.74□□□□□ -0.85
ATM-229ENST00000639953 ARAP1Q96P48 1450 aa9.73□□□□□ -0.85
ATM-229ENST00000639953 CCDC155Q8N6L0 562 aa9.73□□□□□ -0.85
ATM-229ENST00000639953 SLC35F4A4IF30 521 aa9.72□□□□□ -0.85
ATM-229ENST00000639953 ZBBXA8MT70 800 aa9.72□□□□□ -0.85
ATM-229ENST00000639953 FBXO45P0C2W1 286 aa9.72□□□□□ -0.85
ATM-229ENST00000639953 POLMQ9NP87 494 aaPredicted RBP9.72□□□□□ -0.85
ATM-229ENST00000639953 PRXQ9BXM0 1461 aa9.72□□□□□ -0.85
ATM-229ENST00000639953 CYB5RLQ6IPT4 315 aa9.71□□□□□ -0.86
ATM-229ENST00000639953 CYLDQ9NQC7 956 aa9.71□□□□□ -0.86
ATM-229ENST00000639953 PCDHB9Q9Y5E1 797 aa9.71□□□□□ -0.86
ATM-229ENST00000639953 KIAA0586Q9BVV6 1533 aa9.71□□□□□ -0.86
ATM-229ENST00000639953 FAM181BA6NEQ2 426 aa9.7□□□□□ -0.86
ATM-229ENST00000639953 ADH1AP07327 375 aa9.7□□□□□ -0.86
ATM-229ENST00000639953 PTGIRP43119 386 aa9.7□□□□□ -0.86
ATM-229ENST00000639953 KRT76Q01546 638 aa9.7□□□□□ -0.86
ATM-229ENST00000639953 PRG4Q92954 1404 aaPredicted RBP9.7□□□□□ -0.86
ATM-229ENST00000639953 EEA1Q15075 1411 aa9.69□□□□□ -0.86
ATM-229ENST00000639953 TPRNQ4KMQ1 711 aa9.69□□□□□ -0.86
ATM-229ENST00000639953 RNF217Q8TC41 542 aa9.69□□□□□ -0.86
ATM-229ENST00000639953 CTTNBP2Q8WZ74 1663 aa9.69□□□□□ -0.86
ATM-229ENST00000639953 CNTNAP3BQ96NU0 1288 aa9.69□□□□□ -0.86
ATM-229ENST00000639953 CNTNAP3Q9BZ76 1288 aa9.69□□□□□ -0.86
ATM-229ENST00000639953 IQGAP2Q13576 1575 aa9.68□□□□□ -0.86
ATM-229ENST00000639953 VWA5B2Q8N398 1253 aa9.68□□□□□ -0.86
ATM-229ENST00000639953 SNRKQ9NRH2 765 aa9.68□□□□□ -0.86
ATM-229ENST00000639953 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
ATM-229ENST00000639953 SEPT12Q8IYM1 358 aa9.66□□□□□ -0.86
ATM-229ENST00000639953 COL25A1Q9BXS0 654 aaPredicted RBP9.66□□□□□ -0.86
ATM-229ENST00000639953 SENP3-EIF4A1A0A087X0R7 540 aa9.65□□□□□ -0.86
ATM-229ENST00000639953 GPR37L1O60883 481 aa9.65□□□□□ -0.86
ATM-229ENST00000639953 MTMR14Q8NCE2 650 aa9.65□□□□□ -0.86
ATM-229ENST00000639953 NANOS1Q8WY41 292 aaKnown RBP9.65□□□□□ -0.86
ATM-229ENST00000639953 ITGA6P23229 1130 aa9.64□□□□□ -0.87
ATM-229ENST00000639953 RNFT1Q5M7Z0 435 aa9.64□□□□□ -0.87
ATM-229ENST00000639953 PRICKLE2Q7Z3G6 844 aa9.64□□□□□ -0.87
ATM-229ENST00000639953 BANK1Q8NDB2 785 aa9.64□□□□□ -0.87
ATM-229ENST00000639953 KIF21BO75037 1637 aa9.64□□□□□ -0.87
ATM-229ENST00000639953 TTBK1Q5TCY1 1321 aaPredicted RBP9.63□□□□□ -0.87
ATM-229ENST00000639953 CDC14CA4D256 554 aa9.63□□□□□ -0.87
ATM-229ENST00000639953 NR1H3Q13133 447 aa9.63□□□□□ -0.87
ATM-229ENST00000639953 DISP1Q96F81 1524 aa9.62□□□□□ -0.87
ATM-229ENST00000639953 RHOQP17081 205 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms